EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0028469 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc11
Alias: 6030404K05Rik|9230115F04Rik|Kiaa0191|PPAPD3|Tut4|mKIAA0191
Full Name: zinc finger%2C CCHC domain containing 11
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 117392 bases
Position: chr4:109433936-109551327
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0066668	zf-CCHC	PF00098.23	7.9e-11	1	2
MGP_LPJ_P0066668	zf-CCHC	PF00098.23	7.9e-11	2	2
MGP_LPJ_P0066670	zf-CCHC	PF00098.23	8e-11	1	2
MGP_LPJ_P0066670	zf-CCHC	PF00098.23	8e-11	2	2
MGP_LPJ_P0066668	PAP_assoc	PF03828.19	3.4e-28	1	2
MGP_LPJ_P0066668	PAP_assoc	PF03828.19	3.4e-28	2	2
MGP_LPJ_P0066670	PAP_assoc	PF03828.19	3.8e-28	1	2
MGP_LPJ_P0066670	PAP_assoc	PF03828.19	3.8e-28	2	2
MGP_LPJ_P0066671	PAP_assoc	PF03828.19	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0066668	-	6055	XM_006502978	MGP_LPJ_P0066668	1644 (aa)	XP_006503041	B2RX14
MGP_LPJ_T0066669	-	679	-	MGP_LPJ_P0066669	63 (aa)	-	-
MGP_LPJ_T0066678	-	587	-	MGP_LPJ_P0066678	105 (aa)	-	-
MGP_LPJ_T0066675	-	591	-	-	- (aa)	-	-
MGP_LPJ_T0066674	-	567	-	-	- (aa)	-	-
MGP_LPJ_T0066677	-	2473	-	-	- (aa)	-	-
MGP_LPJ_T0066676	-	484	-	-	- (aa)	-	-
MGP_LPJ_T0066671	-	3283	-	MGP_LPJ_P0066671	1006 (aa)	-	-
MGP_LPJ_T0066670	-	5866	-	MGP_LPJ_P0066670	1648 (aa)	-	-
MGP_LPJ_T0066673	-	541	-	-	- (aa)	-	-
MGP_LPJ_T0066672	-	636	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0028469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0028469	Zcchc11	59	58.396	MGP_LPJ_G0020553	Zcchc6	63	67.209