EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0028490 (Gene tree)
Gene ID: -
Gene Symbol: Elavl4
Alias: Elav|Hud|PNEM
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 4 (Hu antigen D)
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 154285 bases
Position: chr4:111270968-111425252
Accession: 107427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0066779	RRM_5	PF13893.6	2.8e-13	1	2
MGP_LPJ_P0066779	RRM_5	PF13893.6	2.8e-13	2	2
MGP_LPJ_P0066778	RRM_5	PF13893.6	3.1e-13	1	2
MGP_LPJ_P0066778	RRM_5	PF13893.6	3.1e-13	2	2
MGP_LPJ_P0066780	RRM_5	PF13893.6	3.2e-13	1	2
MGP_LPJ_P0066780	RRM_5	PF13893.6	3.2e-13	2	2
MGP_LPJ_P0066782	RRM_5	PF13893.6	3.4e-13	1	2
MGP_LPJ_P0066782	RRM_5	PF13893.6	3.4e-13	2	2
MGP_LPJ_P0066783	RRM_5	PF13893.6	3.6e-13	1	2
MGP_LPJ_P0066783	RRM_5	PF13893.6	3.6e-13	2	2
MGP_LPJ_P0066781	RRM_5	PF13893.6	3.9e-13	1	2
MGP_LPJ_P0066781	RRM_5	PF13893.6	3.9e-13	2	2
MGP_LPJ_P0066784	RRM_5	PF13893.6	3.9e-13	1	2
MGP_LPJ_P0066784	RRM_5	PF13893.6	3.9e-13	2	2
MGP_LPJ_P0066779	RRM_1	PF00076.22	2.1e-65	1	3
MGP_LPJ_P0066779	RRM_1	PF00076.22	2.1e-65	2	3
MGP_LPJ_P0066779	RRM_1	PF00076.22	2.1e-65	3	3
MGP_LPJ_P0066780	RRM_1	PF00076.22	2.4e-65	1	3
MGP_LPJ_P0066780	RRM_1	PF00076.22	2.4e-65	2	3
MGP_LPJ_P0066780	RRM_1	PF00076.22	2.4e-65	3	3
MGP_LPJ_P0066778	RRM_1	PF00076.22	2.4e-65	1	3
MGP_LPJ_P0066778	RRM_1	PF00076.22	2.4e-65	2	3
MGP_LPJ_P0066778	RRM_1	PF00076.22	2.4e-65	3	3
MGP_LPJ_P0066782	RRM_1	PF00076.22	2.5e-65	1	3
MGP_LPJ_P0066782	RRM_1	PF00076.22	2.5e-65	2	3
MGP_LPJ_P0066782	RRM_1	PF00076.22	2.5e-65	3	3
MGP_LPJ_P0066783	RRM_1	PF00076.22	2.9e-65	1	3
MGP_LPJ_P0066783	RRM_1	PF00076.22	2.9e-65	2	3
MGP_LPJ_P0066783	RRM_1	PF00076.22	2.9e-65	3	3
MGP_LPJ_P0066781	RRM_1	PF00076.22	2.9e-65	1	3
MGP_LPJ_P0066781	RRM_1	PF00076.22	2.9e-65	2	3
MGP_LPJ_P0066781	RRM_1	PF00076.22	2.9e-65	3	3
MGP_LPJ_P0066784	RRM_1	PF00076.22	3e-65	1	3
MGP_LPJ_P0066784	RRM_1	PF00076.22	3e-65	2	3
MGP_LPJ_P0066784	RRM_1	PF00076.22	3e-65	3	3
MGP_LPJ_P0066786	RRM_1	PF00076.22	1.2e-20	1	1
MGP_LPJ_P0066788	RRM_1	PF00076.22	6.8e-13	1	1
MGP_LPJ_P0066789	RRM_1	PF00076.22	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0066789	-	488	-	MGP_LPJ_P0066789	92 (aa)	-	-
MGP_LPJ_T0066785	-	869	-	-	- (aa)	-	-
MGP_LPJ_T0066788	-	663	-	MGP_LPJ_P0066788	94 (aa)	-	-
MGP_LPJ_T0066781	-	3799	-	MGP_LPJ_P0066781	383 (aa)	-	-
MGP_LPJ_T0066780	-	3775	-	MGP_LPJ_P0066780	366 (aa)	-	-
MGP_LPJ_T0066783	-	4024	-	MGP_LPJ_P0066783	380 (aa)	-	-
MGP_LPJ_T0066782	-	4107	-	MGP_LPJ_P0066782	371 (aa)	-	-
MGP_LPJ_T0066778	-	3997	XM_006502793	MGP_LPJ_P0066778	366 (aa)	XP_006502856	Q61701
MGP_LPJ_T0066779	-	3761	-	MGP_LPJ_P0066779	356 (aa)	-	-
MGP_LPJ_T0066787	-	464	-	-	- (aa)	-	-
MGP_LPJ_T0066784	-	4149	-	MGP_LPJ_P0066784	385 (aa)	-	-
MGP_LPJ_T0066786	-	644	-	MGP_LPJ_P0066786	137 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0028490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0028490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0028490	Elavl4	85	40.741	MGP_LPJ_G0034798	Celf6	95	35.802
MGP_LPJ_G0028490	Elavl4	70	35.484	MGP_LPJ_G0027128	Pabpc4l	96	30.065
MGP_LPJ_G0028490	Elavl4	70	36.458	MGP_LPJ_G0025695	Rbms1	53	32.773
MGP_LPJ_G0028490	Elavl4	88	38.272	MGP_LPJ_G0024123	Celf4	91	35.802
MGP_LPJ_G0028490	Elavl4	70	38.889	MGP_LPJ_G0017398	Cirbp	84	38.889
MGP_LPJ_G0028490	Elavl4	58	31.646	MGP_LPJ_G0035427	Rbm3	82	38.710
MGP_LPJ_G0028490	Elavl4	78	30.088	MGP_LPJ_G0018828	Msi2	84	30.208
MGP_LPJ_G0028490	Elavl4	89	33.735	MGP_LPJ_G0026769	Pabpc1l	62	33.735
MGP_LPJ_G0028490	Elavl4	81	38.272	MGP_LPJ_G0025262	Celf2	61	38.272
MGP_LPJ_G0028490	Elavl4	94	35.897	MGP_LPJ_G0030871	Tia1	98	32.895
MGP_LPJ_G0028490	Elavl4	88	35.897	MGP_LPJ_G0032999	Tial1	73	35.897
MGP_LPJ_G0028490	Elavl4	89	73.585	MGP_LPJ_G0033249	Elavl1	98	73.585
MGP_LPJ_G0028490	Elavl4	72	35.821	MGP_LPJ_G0030625	Tra2a	59	37.097
MGP_LPJ_G0028490	Elavl4	88	34.940	MGP_LPJ_G0024286	Pabpc2	59	34.940
MGP_LPJ_G0028490	Elavl4	78	40.741	MGP_LPJ_G0026076	Celf1	62	40.741
MGP_LPJ_G0028490	Elavl4	66	42.373	MGP_LPJ_G0017404	Dazap1	64	30.275
MGP_LPJ_G0028490	Elavl4	74	33.708	MGP_LPJ_G0035637	Rbmx	86	33.708
MGP_LPJ_G0028490	Elavl4	88	32.468	MGP_LPJ_G0023047	Pabpc6	60	32.468
MGP_LPJ_G0028490	Elavl4	54	33.784	MGP_LPJ_G0027551	Rbm8a	62	30.693
MGP_LPJ_G0028490	Elavl4	85	40.741	MGP_LPJ_G0027482	Celf3	61	40.741
MGP_LPJ_G0028490	Elavl4	88	36.145	MGP_LPJ_G0021700	Pabpc1	58	36.145
MGP_LPJ_G0028490	Elavl4	74	37.500	MGP_LPJ_G0017472	Celf5	89	30.120
MGP_LPJ_G0028490	Elavl4	99	89.315	MGP_LPJ_G0028358	Elavl2	100	89.751
MGP_LPJ_G0028490	Elavl4	99	79.893	MGP_LPJ_G0034372	Elavl3	99	80.323
MGP_LPJ_G0028490	Elavl4	70	36.458	MGP_LPJ_G0035290	Rbms3	83	37.097
MGP_LPJ_G0028490	Elavl4	57	37.037	MGP_LPJ_G0029999	Snrnp35	59	33.803