EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0028959 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 24663 bases
Position: chr4:144528083-144552745
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_LPJ_P0068844	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_LPJ_P0068844	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0068848	-	785	-	-	- (aa)	-	-
MGP_LPJ_T0068849	-	771	-	-	- (aa)	-	-
MGP_LPJ_T0068850	-	867	-	-	- (aa)	-	-
MGP_LPJ_T0068844	-	2722	XM_006538727	MGP_LPJ_P0068844	794 (aa)	XP_006538790	Q60821
MGP_LPJ_T0068845	-	3470	-	-	- (aa)	-	-
MGP_LPJ_T0068846	-	2973	-	-	- (aa)	-	-
MGP_LPJ_T0068847	-	337	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0028959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0028959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0028959	Zbtb17	54	46.512	MGP_LPJ_G0034047	Zfp1	67	42.083
MGP_LPJ_G0028959	Zbtb17	59	32.021	MGP_LPJ_G0031756	Zfp574	71	38.532
MGP_LPJ_G0028959	Zbtb17	61	42.727	MGP_LPJ_G0024520	Zfp236	69	42.727
MGP_LPJ_G0028959	Zbtb17	64	42.899	MGP_LPJ_G0023139	Zfp677	83	42.899
MGP_LPJ_G0028959	Zbtb17	55	43.322	MGP_LPJ_G0018163	Zfp454	65	42.424
MGP_LPJ_G0028959	Zbtb17	59	36.986	MGP_LPJ_G0018260	Zfp672	90	40.000
MGP_LPJ_G0028959	Zbtb17	63	42.606	MGP_LPJ_G0023141	Zfp51	82	42.183
MGP_LPJ_G0028959	Zbtb17	62	34.819	MGP_LPJ_G0033890	Zfp319	91	37.805
MGP_LPJ_G0028959	Zbtb17	61	43.636	MGP_LPJ_G0031719	Zfp112	59	43.636
MGP_LPJ_G0028959	Zbtb17	74	44.444	MGP_LPJ_G0018491	Bcl6b	68	45.312
MGP_LPJ_G0028959	Zbtb17	56	34.254	MGP_LPJ_G0026827	Zfp334	65	39.216
MGP_LPJ_G0028959	Zbtb17	58	40.968	MGP_LPJ_G0033673	Zfp882	85	42.985
MGP_LPJ_G0028959	Zbtb17	55	44.224	MGP_LPJ_G0032019	Zfp141	73	44.224
MGP_LPJ_G0028959	Zbtb17	58	47.260	MGP_LPJ_G0032013	2610021A01Rik	54	47.260
MGP_LPJ_G0028959	Zbtb17	63	38.614	MGP_LPJ_G0030603	Repin1	93	38.614
MGP_LPJ_G0028959	Zbtb17	69	44.706	MGP_LPJ_G0031892	Zfp420	97	44.706
MGP_LPJ_G0028959	Zbtb17	58	42.857	MGP_LPJ_G0032020	Zfp715	89	43.636
MGP_LPJ_G0028959	Zbtb17	72	34.627	MGP_LPJ_G0023165	Zscan10	78	43.165
MGP_LPJ_G0028959	Zbtb17	71	39.572	MGP_LPJ_G0023161	Zfp945	93	39.583
MGP_LPJ_G0028959	Zbtb17	78	39.568	MGP_LPJ_G0026547	Gzf1	83	39.568
MGP_LPJ_G0028959	Zbtb17	61	40.576	MGP_LPJ_G0034316	Zfp26	79	43.413
MGP_LPJ_G0028959	Zbtb17	79	32.955	MGP_LPJ_G0020879	Zfp131	72	32.955
MGP_LPJ_G0028959	Zbtb17	62	41.141	MGP_LPJ_G0020605	Zfp759	87	41.141
MGP_LPJ_G0028959	Zbtb17	55	41.241	MGP_LPJ_G0020604	Rslcan18	66	47.826
MGP_LPJ_G0028959	Zbtb17	56	44.207	MGP_LPJ_G0031724	Zfp108	66	44.207
MGP_LPJ_G0028959	Zbtb17	56	44.086	MGP_LPJ_G0031726	Zfp94	76	44.086
MGP_LPJ_G0028959	Zbtb17	62	50.909	MGP_LPJ_G0029407	Zbtb49	62	67.742
MGP_LPJ_G0028959	Zbtb17	58	42.857	MGP_LPJ_G0032949	Zfp768	52	42.231
MGP_LPJ_G0028959	Zbtb17	58	40.088	MGP_LPJ_G0031827	-	87	40.088
MGP_LPJ_G0028959	Zbtb17	56	40.741	MGP_LPJ_G0031481	Zfp865	78	35.743
MGP_LPJ_G0028959	Zbtb17	55	41.083	MGP_LPJ_G0018308	Zfp867	81	41.083
MGP_LPJ_G0028959	Zbtb17	79	46.354	MGP_LPJ_G0027059	Mynn	85	46.354