EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0029407 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb49
Alias: 4930518A03Rik|Zfp509|Znf509
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 30881 bases
Position: chr5:37045286-37076166
Accession: 1922329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0071221	zf-C2H2	PF00096.26	1.7e-35	1	7
MGP_LPJ_P0071221	zf-C2H2	PF00096.26	1.7e-35	2	7
MGP_LPJ_P0071221	zf-C2H2	PF00096.26	1.7e-35	3	7
MGP_LPJ_P0071221	zf-C2H2	PF00096.26	1.7e-35	4	7
MGP_LPJ_P0071221	zf-C2H2	PF00096.26	1.7e-35	5	7
MGP_LPJ_P0071221	zf-C2H2	PF00096.26	1.7e-35	6	7
MGP_LPJ_P0071221	zf-C2H2	PF00096.26	1.7e-35	7	7
MGP_LPJ_P0071226	zf-C2H2	PF00096.26	1.7e-09	1	2
MGP_LPJ_P0071226	zf-C2H2	PF00096.26	1.7e-09	2	2
MGP_LPJ_P0071229	zf-C2H2	PF00096.26	8e-06	1	1
MGP_LPJ_P0071221	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0071228	-	420	-	MGP_LPJ_P0071228	51 (aa)	-	-
MGP_LPJ_T0071229	-	2645	-	MGP_LPJ_P0071229	480 (aa)	-	-
MGP_LPJ_T0071226	-	463	-	MGP_LPJ_P0071226	120 (aa)	-	-
MGP_LPJ_T0071227	-	688	-	MGP_LPJ_P0071227	95 (aa)	-	-
MGP_LPJ_T0071224	-	2028	-	MGP_LPJ_P0071224	65 (aa)	-	-
MGP_LPJ_T0071225	-	2271	-	MGP_LPJ_P0071225	444 (aa)	-	-
MGP_LPJ_T0071222	-	2721	-	MGP_LPJ_P0071222	428 (aa)	-	-
MGP_LPJ_T0071223	-	1654	-	MGP_LPJ_P0071223	110 (aa)	-	-
MGP_LPJ_T0071220	-	2868	-	-	- (aa)	-	-
MGP_LPJ_T0071221	-	2978	-	MGP_LPJ_P0071221	756 (aa)	-	-
MGP_LPJ_T0071230	-	1337	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0029407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0029407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0029407	Zbtb49	90	50.704	MGP_LPJ_G0027059	Mynn	85	45.128
MGP_LPJ_G0029407	Zbtb49	64	48.052	MGP_LPJ_G0020604	Rslcan18	64	48.503
MGP_LPJ_G0029407	Zbtb49	75	45.833	MGP_LPJ_G0020605	Zfp759	91	45.503
MGP_LPJ_G0029407	Zbtb49	78	46.479	MGP_LPJ_G0023139	Zfp677	79	46.500
MGP_LPJ_G0029407	Zbtb49	74	47.297	MGP_LPJ_G0031725	Zfp61	53	47.938
MGP_LPJ_G0029407	Zbtb49	59	49.296	MGP_LPJ_G0031724	Zfp108	66	48.077
MGP_LPJ_G0029407	Zbtb49	82	50.000	MGP_LPJ_G0031726	Zfp94	76	48.454
MGP_LPJ_G0029407	Zbtb49	62	45.205	MGP_LPJ_G0018891	Zfp652	57	42.593
MGP_LPJ_G0029407	Zbtb49	78	47.143	MGP_LPJ_G0018260	Zfp672	96	48.214
MGP_LPJ_G0029407	Zbtb49	62	67.742	MGP_LPJ_G0028959	Zbtb17	62	50.909
MGP_LPJ_G0029407	Zbtb49	77	45.833	MGP_LPJ_G0023161	Zfp945	77	43.455
MGP_LPJ_G0029407	Zbtb49	89	47.222	MGP_LPJ_G0031827	-	86	42.735
MGP_LPJ_G0029407	Zbtb49	62	51.786	MGP_LPJ_G0029744	Gfi1	100	49.219
MGP_LPJ_G0029407	Zbtb49	94	45.833	MGP_LPJ_G0026827	Zfp334	65	47.436
MGP_LPJ_G0029407	Zbtb49	68	46.032	MGP_LPJ_G0026401	Zfp661	60	44.845
MGP_LPJ_G0029407	Zbtb49	76	48.611	MGP_LPJ_G0034047	Zfp1	63	49.485
MGP_LPJ_G0029407	Zbtb49	62	47.887	MGP_LPJ_G0024520	Zfp236	62	43.023
MGP_LPJ_G0029407	Zbtb49	69	47.887	MGP_LPJ_G0034316	Zfp26	80	47.668
MGP_LPJ_G0029407	Zbtb49	60	47.619	MGP_LPJ_G0023906	Zbtb14	63	46.000
MGP_LPJ_G0029407	Zbtb49	63	50.000	MGP_LPJ_G0018163	Zfp454	65	47.423
MGP_LPJ_G0029407	Zbtb49	96	45.070	MGP_LPJ_G0030735	Prdm5	79	40.244
MGP_LPJ_G0029407	Zbtb49	76	50.000	MGP_LPJ_G0032949	Zfp768	51	48.810
MGP_LPJ_G0029407	Zbtb49	60	45.588	MGP_LPJ_G0023147	Gm10226	100	47.561
MGP_LPJ_G0029407	Zbtb49	78	48.611	MGP_LPJ_G0023141	Zfp51	81	45.361
MGP_LPJ_G0029407	Zbtb49	73	49.275	MGP_LPJ_G0032020	Zfp715	62	45.026
MGP_LPJ_G0029407	Zbtb49	89	50.000	MGP_LPJ_G0031892	Zfp420	98	48.744
MGP_LPJ_G0029407	Zbtb49	62	43.836	MGP_LPJ_G0035338	Zfp651	71	43.519
MGP_LPJ_G0029407	Zbtb49	78	44.872	MGP_LPJ_G0018308	Zfp867	84	48.187
MGP_LPJ_G0029407	Zbtb49	64	47.945	MGP_LPJ_G0032952	E430018J23Rik	62	45.000
MGP_LPJ_G0029407	Zbtb49	62	51.389	MGP_LPJ_G0032013	2610021A01Rik	56	49.223
MGP_LPJ_G0029407	Zbtb49	62	51.389	MGP_LPJ_G0032019	Zfp141	63	47.849
MGP_LPJ_G0029407	Zbtb49	95	48.611	MGP_LPJ_G0021915	Zfp251	69	49.741
MGP_LPJ_G0029407	Zbtb49	60	47.222	MGP_LPJ_G0030603	Repin1	95	38.889
MGP_LPJ_G0029407	Zbtb49	74	50.000	MGP_LPJ_G0031756	Zfp574	60	43.651
MGP_LPJ_G0029407	Zbtb49	78	45.833	MGP_LPJ_G0031076	Zfp637	78	46.061
MGP_LPJ_G0029407	Zbtb49	62	46.479	MGP_LPJ_G0026547	Gzf1	66	44.103
MGP_LPJ_G0029407	Zbtb49	63	55.882	MGP_LPJ_G0031473	Zfp628	53	41.949
MGP_LPJ_G0029407	Zbtb49	62	50.704	MGP_LPJ_G0023165	Zscan10	78	47.953
MGP_LPJ_G0029407	Zbtb49	62	47.887	MGP_LPJ_G0016471	Zbtb41	71	41.279
MGP_LPJ_G0029407	Zbtb49	85	45.714	MGP_LPJ_G0033673	Zfp882	85	46.114
MGP_LPJ_G0029407	Zbtb49	60	45.714	MGP_LPJ_G0018491	Bcl6b	54	47.368