EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0029664 (Gene tree)
Gene ID: -
Gene Symbol: Cnot6l
Alias: 4932442K20Rik
Full Name: CCR4-NOT transcription complex%2C subunit 6-like
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 98742 bases
Position: chr5:97955725-98054466
Accession: 2443154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0072514	Exo_endo_phos	PF03372.23	4.5e-22	1	1
MGP_LPJ_P0072513	Exo_endo_phos	PF03372.23	4.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0072515	-	784	-	-	- (aa)	-	-
MGP_LPJ_T0072514	-	1923	-	MGP_LPJ_P0072514	550 (aa)	-	-
MGP_LPJ_T0072517	-	329	-	MGP_LPJ_P0072517	99 (aa)	-	-
MGP_LPJ_T0072516	-	526	-	MGP_LPJ_P0072516	130 (aa)	-	-
MGP_LPJ_T0072511	-	3040	-	-	- (aa)	-	-
MGP_LPJ_T0072513	-	3170	-	MGP_LPJ_P0072513	555 (aa)	-	-
MGP_LPJ_T0072512	-	3314	-	MGP_LPJ_P0072512	46 (aa)	-	-
MGP_LPJ_T0072519	-	232	-	MGP_LPJ_P0072519	55 (aa)	-	-
MGP_LPJ_T0072518	-	421	-	MGP_LPJ_P0072518	87 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

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Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0029664	Cnot6l	100	77.355	MGP_LPJ_G0018144	Cnot6	100	77.355