EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0029683 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 7705 bases
Position: chr5:102091405-102099109
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0072588	RRM_1	PF00076.22	2.3e-33	1	2
MGP_LPJ_P0072588	RRM_1	PF00076.22	2.3e-33	2	2
MGP_LPJ_P0072587	RRM_1	PF00076.22	5.3e-33	1	2
MGP_LPJ_P0072587	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0072588	-	2374	-	MGP_LPJ_P0072588	322 (aa)	-	-
MGP_LPJ_T0072589	-	2149	-	MGP_LPJ_P0072589	420 (aa)	-	-
MGP_LPJ_T0072586	-	1842	-	-	- (aa)	-	-
MGP_LPJ_T0072591	-	1477	-	MGP_LPJ_P0072591	100 (aa)	-	-
MGP_LPJ_T0072587	-	2752	-	MGP_LPJ_P0072587	420 (aa)	-	-
MGP_LPJ_T0072590	-	884	-	-	- (aa)	-	-
MGP_LPJ_T0072592	-	846	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0029683	Hnrnpdl	89	57.292	MGP_LPJ_G0018178	Hnrnpab	82	58.419
MGP_LPJ_G0029683	Hnrnpdl	64	30.000	MGP_LPJ_G0029032	Tardbp	56	32.117
MGP_LPJ_G0029683	Hnrnpdl	78	41.634	MGP_LPJ_G0018828	Msi2	100	54.867
MGP_LPJ_G0029683	Hnrnpdl	87	65.074	MGP_LPJ_G0029681	Hnrnpd	80	72.674
MGP_LPJ_G0029683	Hnrnpdl	51	34.706	MGP_LPJ_G0020535	Hnrnpa0	56	34.706
MGP_LPJ_G0029683	Hnrnpdl	58	38.542	MGP_LPJ_G0030637	Hnrnpa2b1	58	38.824
MGP_LPJ_G0029683	Hnrnpdl	75	39.676	MGP_LPJ_G0029870	Msi1	58	48.052
MGP_LPJ_G0029683	Hnrnpdl	69	36.036	MGP_LPJ_G0017404	Dazap1	99	39.881
MGP_LPJ_G0029683	Hnrnpdl	54	36.709	MGP_LPJ_G0017398	Cirbp	73	36.709
MGP_LPJ_G0029683	Hnrnpdl	65	34.118	MGP_LPJ_G0025788	Hnrnpa3	85	32.184