EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0029744 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 11160 bases
Position: chr5:110349840-110360999
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0072866	zf-C2H2	PF00096.26	5e-28	1	6
MGP_LPJ_P0072866	zf-C2H2	PF00096.26	5e-28	2	6
MGP_LPJ_P0072866	zf-C2H2	PF00096.26	5e-28	3	6
MGP_LPJ_P0072866	zf-C2H2	PF00096.26	5e-28	4	6
MGP_LPJ_P0072866	zf-C2H2	PF00096.26	5e-28	5	6
MGP_LPJ_P0072866	zf-C2H2	PF00096.26	5e-28	6	6
MGP_LPJ_P0072867	zf-C2H2	PF00096.26	5e-28	1	6
MGP_LPJ_P0072867	zf-C2H2	PF00096.26	5e-28	2	6
MGP_LPJ_P0072867	zf-C2H2	PF00096.26	5e-28	3	6
MGP_LPJ_P0072867	zf-C2H2	PF00096.26	5e-28	4	6
MGP_LPJ_P0072867	zf-C2H2	PF00096.26	5e-28	5	6
MGP_LPJ_P0072867	zf-C2H2	PF00096.26	5e-28	6	6
MGP_LPJ_P0072868	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_LPJ_P0072868	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_LPJ_P0072868	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_LPJ_P0072868	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_LPJ_P0072868	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_LPJ_P0072868	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_LPJ_P0072869	zf-C2H2	PF00096.26	9.4e-25	1	4
MGP_LPJ_P0072869	zf-C2H2	PF00096.26	9.4e-25	2	4
MGP_LPJ_P0072869	zf-C2H2	PF00096.26	9.4e-25	3	4
MGP_LPJ_P0072869	zf-C2H2	PF00096.26	9.4e-25	4	4
MGP_LPJ_P0072869	zf-met	PF12874.7	2.2e-08	1	1
MGP_LPJ_P0072866	zf-met	PF12874.7	2.5e-07	1	1
MGP_LPJ_P0072867	zf-met	PF12874.7	2.5e-07	1	1
MGP_LPJ_P0072868	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0072869	-	1482	-	MGP_LPJ_P0072869	135 (aa)	-	-
MGP_LPJ_T0072868	-	2639	-	MGP_LPJ_P0072868	489 (aa)	-	-
MGP_LPJ_T0072870	-	689	-	MGP_LPJ_P0072870	186 (aa)	-	-
MGP_LPJ_T0072867	-	2860	-	MGP_LPJ_P0072867	423 (aa)	-	-
MGP_LPJ_T0072866	-	2648	XM_006534791	MGP_LPJ_P0072866	423 (aa)	XP_006534854	A0A0R4J292

Gene Model

Click here to download MGP_LPJ_G0029744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0029744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0029744	Gfi1	100	44.444	MGP_LPJ_G0020605	Zfp759	89	44.444
MGP_LPJ_G0029744	Gfi1	100	42.969	MGP_LPJ_G0031827	-	86	46.825
MGP_LPJ_G0029744	Gfi1	100	50.000	MGP_LPJ_G0032019	Zfp141	66	50.000
MGP_LPJ_G0029744	Gfi1	100	50.467	MGP_LPJ_G0032013	2610021A01Rik	56	48.276
MGP_LPJ_G0029744	Gfi1	99	48.507	MGP_LPJ_G0026401	Zfp661	62	48.507
MGP_LPJ_G0029744	Gfi1	99	47.368	MGP_LPJ_G0031481	Zfp865	63	47.368
MGP_LPJ_G0029744	Gfi1	99	44.444	MGP_LPJ_G0031484	Zfp784	71	44.444
MGP_LPJ_G0029744	Gfi1	100	46.296	MGP_LPJ_G0031725	Zfp61	57	46.296
MGP_LPJ_G0029744	Gfi1	100	50.427	MGP_LPJ_G0031724	Zfp108	69	47.863
MGP_LPJ_G0029744	Gfi1	100	46.457	MGP_LPJ_G0031726	Zfp94	65	44.970
MGP_LPJ_G0029744	Gfi1	99	47.287	MGP_LPJ_G0030603	Repin1	90	47.287
MGP_LPJ_G0029744	Gfi1	100	43.307	MGP_LPJ_G0023161	Zfp945	81	39.881
MGP_LPJ_G0029744	Gfi1	100	46.094	MGP_LPJ_G0033673	Zfp882	85	46.094
MGP_LPJ_G0029744	Gfi1	100	45.794	MGP_LPJ_G0018163	Zfp454	68	42.262
MGP_LPJ_G0029744	Gfi1	100	49.219	MGP_LPJ_G0029407	Zbtb49	62	51.786
MGP_LPJ_G0029744	Gfi1	100	48.507	MGP_LPJ_G0031892	Zfp420	98	48.507
MGP_LPJ_G0029744	Gfi1	100	50.746	MGP_LPJ_G0034316	Zfp26	77	47.159
MGP_LPJ_G0029744	Gfi1	99	45.714	MGP_LPJ_G0031756	Zfp574	61	43.925
MGP_LPJ_G0029744	Gfi1	100	48.062	MGP_LPJ_G0031473	Zfp628	54	48.062
MGP_LPJ_G0029744	Gfi1	100	46.457	MGP_LPJ_G0034047	Zfp1	60	46.457
MGP_LPJ_G0029744	Gfi1	100	43.590	MGP_LPJ_G0031076	Zfp637	71	43.590
MGP_LPJ_G0029744	Gfi1	100	42.857	MGP_LPJ_G0023165	Zscan10	85	42.771
MGP_LPJ_G0029744	Gfi1	100	49.254	MGP_LPJ_G0021915	Zfp251	67	49.254
MGP_LPJ_G0029744	Gfi1	100	46.739	MGP_LPJ_G0024520	Zfp236	54	46.739
MGP_LPJ_G0029744	Gfi1	100	47.788	MGP_LPJ_G0020604	Rslcan18	71	47.788
MGP_LPJ_G0029744	Gfi1	100	47.368	MGP_LPJ_G0026864	Zfp64	70	38.298
MGP_LPJ_G0029744	Gfi1	100	45.312	MGP_LPJ_G0023139	Zfp677	82	43.195
MGP_LPJ_G0029744	Gfi1	100	48.276	MGP_LPJ_G0018260	Zfp672	90	48.276
MGP_LPJ_G0029744	Gfi1	100	54.321	MGP_LPJ_G0032949	Zfp768	51	45.517
MGP_LPJ_G0029744	Gfi1	100	47.863	MGP_LPJ_G0026827	Zfp334	65	47.651
MGP_LPJ_G0029744	Gfi1	100	46.269	MGP_LPJ_G0023141	Zfp51	74	44.828
MGP_LPJ_G0029744	Gfi1	100	44.882	MGP_LPJ_G0032020	Zfp715	63	43.210
MGP_LPJ_G0029744	Gfi1	100	39.535	MGP_LPJ_G0033890	Zfp319	93	40.116
MGP_LPJ_G0029744	Gfi1	99	45.133	MGP_LPJ_G0030735	Prdm5	74	43.846
MGP_LPJ_G0029744	Gfi1	100	45.238	MGP_LPJ_G0018308	Zfp867	79	43.023
MGP_LPJ_G0029744	Gfi1	99	45.038	MGP_LPJ_G0032952	E430018J23Rik	60	42.197