EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0029901 (Gene tree)
Gene ID: -
Gene Symbol: Rbm19
Alias: 1200009A02Rik|AV302714|NPO
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 87056 bases
Position: chr5:123905290-123992345
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0073664	RRM_1	PF00076.22	1.1e-85	1	5
MGP_LPJ_P0073664	RRM_1	PF00076.22	1.1e-85	2	5
MGP_LPJ_P0073664	RRM_1	PF00076.22	1.1e-85	3	5
MGP_LPJ_P0073664	RRM_1	PF00076.22	1.1e-85	4	5
MGP_LPJ_P0073664	RRM_1	PF00076.22	1.1e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0073673	-	360	-	-	- (aa)	-	-
MGP_LPJ_T0073672	-	391	-	-	- (aa)	-	-
MGP_LPJ_T0073671	-	1933	-	-	- (aa)	-	-
MGP_LPJ_T0073670	-	485	-	-	- (aa)	-	-
MGP_LPJ_T0073664	-	4010	-	MGP_LPJ_P0073664	952 (aa)	-	Q8R3C6
MGP_LPJ_T0073665	-	455	-	-	- (aa)	-	-
MGP_LPJ_T0073666	-	3900	-	MGP_LPJ_P0073666	870 (aa)	-	-
MGP_LPJ_T0073667	-	600	-	-	- (aa)	-	-
MGP_LPJ_T0073668	-	1396	-	-	- (aa)	-	-
MGP_LPJ_T0073669	-	635	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0029901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0029901	Rbm19	70	34.667	MGP_LPJ_G0023047	Pabpc6	57	34.667
MGP_LPJ_G0029901	Rbm19	62	34.667	MGP_LPJ_G0021700	Pabpc1	58	34.667
MGP_LPJ_G0029901	Rbm19	72	36.066	MGP_LPJ_G0026769	Pabpc1l	60	35.484
MGP_LPJ_G0029901	Rbm19	70	34.667	MGP_LPJ_G0024286	Pabpc2	59	34.667