EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0030002 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 13480 bases
Position: chr5:128919126-128932605
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0074263	ResIII	PF04851.15	5.6e-07	1	1
MGP_LPJ_P0074263	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0074265	-	477	-	-	- (aa)	-	-
MGP_LPJ_T0074264	-	445	-	-	- (aa)	-	-
MGP_LPJ_T0074267	-	824	-	-	- (aa)	-	-
MGP_LPJ_T0074266	-	1429	-	-	- (aa)	-	-
MGP_LPJ_T0074263	-	1857	-	MGP_LPJ_P0074263	618 (aa)	-	-
MGP_LPJ_T0074262	-	3516	-	MGP_LPJ_P0074262	135 (aa)	-	Q6ZPL9

Gene Model

Click here to download MGP_LPJ_G0030002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0030002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0030002	Ddx55	58	30.886	MGP_LPJ_G0033979	Ddx28	69	30.886
MGP_LPJ_G0030002	Ddx55	73	38.631	MGP_LPJ_G0034702	Ddx10	50	38.631
MGP_LPJ_G0030002	Ddx55	57	30.137	MGP_LPJ_G0019215	Ddx5	66	30.137
MGP_LPJ_G0030002	Ddx55	72	31.528	MGP_LPJ_G0025464	Ddx31	74	31.528
MGP_LPJ_G0030002	Ddx55	56	33.056	MGP_LPJ_G0033607	Ddx49	92	33.238
MGP_LPJ_G0030002	Ddx55	57	32.687	MGP_LPJ_G0021977	Ddx17	53	32.687
MGP_LPJ_G0030002	Ddx55	58	32.044	MGP_LPJ_G0034961	Ddx43	53	32.044
MGP_LPJ_G0030002	Ddx55	57	35.200	MGP_LPJ_G0035462	Ddx3x	54	35.106
MGP_LPJ_G0030002	Ddx55	57	35.733	MGP_LPJ_G0016837	D1Pas1	54	35.733
MGP_LPJ_G0030002	Ddx55	61	30.750	MGP_LPJ_G0018766	Ddx52	62	30.750
MGP_LPJ_G0030002	Ddx55	58	30.137	MGP_LPJ_G0022580	Eif4a2	90	35.849
MGP_LPJ_G0030002	Ddx55	57	35.635	MGP_LPJ_G0020510	Ddx41	55	35.440
MGP_LPJ_G0030002	Ddx55	57	35.977	MGP_LPJ_G0031317	Ddx47	81	35.977