EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0030637 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 8962 bases
Position: chr6:50618281-50627242
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0077311	RRM_1	PF00076.22	3.3e-32	1	2
MGP_LPJ_P0077311	RRM_1	PF00076.22	3.3e-32	2	2
MGP_LPJ_P0077317	RRM_1	PF00076.22	3.3e-32	1	2
MGP_LPJ_P0077317	RRM_1	PF00076.22	3.3e-32	2	2
MGP_LPJ_P0077314	RRM_1	PF00076.22	5e-32	1	2
MGP_LPJ_P0077314	RRM_1	PF00076.22	5e-32	2	2
MGP_LPJ_P0077318	RRM_1	PF00076.22	5e-32	1	2
MGP_LPJ_P0077318	RRM_1	PF00076.22	5e-32	2	2
MGP_LPJ_P0077316	RRM_1	PF00076.22	5.5e-32	1	2
MGP_LPJ_P0077316	RRM_1	PF00076.22	5.5e-32	2	2
MGP_LPJ_P0077320	RRM_1	PF00076.22	1.9e-15	1	1
MGP_LPJ_P0077320	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_LPJ_P0077311	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_LPJ_P0077317	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0077321	-	706	-	-	- (aa)	-	-
MGP_LPJ_T0077311	-	1647	XM_006506373	MGP_LPJ_P0077311	301 (aa)	XP_006506436	O88569
MGP_LPJ_T0077312	-	1703	-	MGP_LPJ_P0077312	353 (aa)	-	-
MGP_LPJ_T0077313	-	1542	-	MGP_LPJ_P0077313	301 (aa)	-	-
MGP_LPJ_T0077314	-	1662	-	MGP_LPJ_P0077314	341 (aa)	-	-
MGP_LPJ_T0077315	-	1554	-	-	- (aa)	-	-
MGP_LPJ_T0077316	-	1728	-	MGP_LPJ_P0077316	353 (aa)	-	-
MGP_LPJ_T0077317	-	1518	-	MGP_LPJ_P0077317	301 (aa)	-	-
MGP_LPJ_T0077318	-	1638	-	MGP_LPJ_P0077318	341 (aa)	-	-
MGP_LPJ_T0077319	-	766	-	-	- (aa)	-	-
MGP_LPJ_T0077323	-	3645	-	-	- (aa)	-	-
MGP_LPJ_T0077322	-	596	-	-	- (aa)	-	-
MGP_LPJ_T0077320	-	466	-	MGP_LPJ_P0077320	154 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0030637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0030637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0030637	Hnrnpa2b1	56	48.193	MGP_LPJ_G0018828	Msi2	100	44.348
MGP_LPJ_G0030637	Hnrnpa2b1	60	41.026	MGP_LPJ_G0017404	Dazap1	99	40.237
MGP_LPJ_G0030637	Hnrnpa2b1	66	32.143	MGP_LPJ_G0034798	Celf6	79	31.250
MGP_LPJ_G0030637	Hnrnpa2b1	91	41.379	MGP_LPJ_G0029870	Msi1	61	43.750
MGP_LPJ_G0030637	Hnrnpa2b1	56	38.554	MGP_LPJ_G0035637	Rbmx	90	40.299
MGP_LPJ_G0030637	Hnrnpa2b1	50	44.737	MGP_LPJ_G0017398	Cirbp	70	44.737
MGP_LPJ_G0030637	Hnrnpa2b1	58	38.824	MGP_LPJ_G0029683	Hnrnpdl	58	38.542
MGP_LPJ_G0030637	Hnrnpa2b1	72	41.148	MGP_LPJ_G0029681	Hnrnpd	83	41.053
MGP_LPJ_G0030637	Hnrnpa2b1	59	55.307	MGP_LPJ_G0020535	Hnrnpa0	91	49.640
MGP_LPJ_G0030637	Hnrnpa2b1	82	74.286	MGP_LPJ_G0022337	Hnrnpa1	88	55.319
MGP_LPJ_G0030637	Hnrnpa2b1	61	38.068	MGP_LPJ_G0018178	Hnrnpab	64	37.368
MGP_LPJ_G0030637	Hnrnpa2b1	66	30.348	MGP_LPJ_G0029032	Tardbp	65	30.928
MGP_LPJ_G0030637	Hnrnpa2b1	91	55.970	MGP_LPJ_G0020750	Gm17190	73	58.113
MGP_LPJ_G0030637	Hnrnpa2b1	59	61.538	MGP_LPJ_G0025788	Hnrnpa3	53	64.851
MGP_LPJ_G0030637	Hnrnpa2b1	69	31.776	MGP_LPJ_G0015950	Boll	64	33.333