EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0030730 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 71591 bases
Position: chr6:64921341-64992931
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0077645	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0077658	-	2526	-	-	- (aa)	-	-
MGP_LPJ_T0077656	-	3062	-	-	- (aa)	-	-
MGP_LPJ_T0077651	-	2821	-	-	- (aa)	-	-
MGP_LPJ_T0077650	-	739	-	MGP_LPJ_P0077650	73 (aa)	-	-
MGP_LPJ_T0077648	-	734	-	MGP_LPJ_P0077648	73 (aa)	-	-
MGP_LPJ_T0077649	-	472	-	MGP_LPJ_P0077649	68 (aa)	-	-
MGP_LPJ_T0077653	-	643	-	-	- (aa)	-	-
MGP_LPJ_T0077655	-	726	-	MGP_LPJ_P0077655	45 (aa)	-	-
MGP_LPJ_T0077654	-	635	-	-	- (aa)	-	-
MGP_LPJ_T0077657	-	643	-	-	- (aa)	-	-
MGP_LPJ_T0077652	-	4179	-	MGP_LPJ_P0077652	123 (aa)	-	-
MGP_LPJ_T0077646	-	466	-	-	- (aa)	-	-
MGP_LPJ_T0077647	-	600	-	MGP_LPJ_P0077647	73 (aa)	-	-
MGP_LPJ_T0077644	-	602	XM_006505509	MGP_LPJ_P0077644	134 (aa)	XP_006505572	Q04692
MGP_LPJ_T0077645	-	5168	-	MGP_LPJ_P0077645	1021 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0030730	Smarcad1	51	37.705	MGP_LPJ_G0025024	Hells	66	37.887
MGP_LPJ_G0030730	Smarcad1	50	35.135	MGP_LPJ_G0027568	Chd1l	51	35.135
MGP_LPJ_G0030730	Smarcad1	50	30.112	MGP_LPJ_G0028531	Rad54l	66	30.112