EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0078350	RRM_1	PF00076.22	4.5e-68	1	3
MGP_LPJ_P0078350	RRM_1	PF00076.22	4.5e-68	2	3
MGP_LPJ_P0078350	RRM_1	PF00076.22	4.5e-68	3	3
MGP_LPJ_P0078344	RRM_1	PF00076.22	1.9e-67	1	3
MGP_LPJ_P0078344	RRM_1	PF00076.22	1.9e-67	2	3
MGP_LPJ_P0078344	RRM_1	PF00076.22	1.9e-67	3	3
MGP_LPJ_P0078337	RRM_1	PF00076.22	2.1e-67	1	3
MGP_LPJ_P0078337	RRM_1	PF00076.22	2.1e-67	2	3
MGP_LPJ_P0078337	RRM_1	PF00076.22	2.1e-67	3	3
MGP_LPJ_P0078336	RRM_1	PF00076.22	2.1e-67	1	3
MGP_LPJ_P0078336	RRM_1	PF00076.22	2.1e-67	2	3
MGP_LPJ_P0078336	RRM_1	PF00076.22	2.1e-67	3	3
MGP_LPJ_P0078345	RRM_1	PF00076.22	2.3e-58	1	3
MGP_LPJ_P0078345	RRM_1	PF00076.22	2.3e-58	2	3
MGP_LPJ_P0078345	RRM_1	PF00076.22	2.3e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0078337	-	1789	-	MGP_LPJ_P0078337	385 (aa)	-	-
MGP_LPJ_T0078336	-	4476	XM_006505889	MGP_LPJ_P0078336	386 (aa)	XP_006505952	P52912
MGP_LPJ_T0078339	-	422	-	-	- (aa)	-	-
MGP_LPJ_T0078338	-	934	-	-	- (aa)	-	-
MGP_LPJ_T0078355	-	706	-	-	- (aa)	-	-
MGP_LPJ_T0078354	-	2664	-	-	- (aa)	-	-
MGP_LPJ_T0078357	-	758	-	-	- (aa)	-	-
MGP_LPJ_T0078356	-	750	-	-	- (aa)	-	-
MGP_LPJ_T0078351	-	864	-	-	- (aa)	-	-
MGP_LPJ_T0078350	-	3107	-	MGP_LPJ_P0078350	377 (aa)	-	-
MGP_LPJ_T0078353	-	1892	-	-	- (aa)	-	-
MGP_LPJ_T0078352	-	823	-	-	- (aa)	-	-
MGP_LPJ_T0078359	-	877	-	-	- (aa)	-	-
MGP_LPJ_T0078358	-	627	-	-	- (aa)	-	-
MGP_LPJ_T0078360	-	2511	-	-	- (aa)	-	-
MGP_LPJ_T0078361	-	716	-	-	- (aa)	-	-
MGP_LPJ_T0078362	-	585	-	-	- (aa)	-	-
MGP_LPJ_T0078363	-	597	-	MGP_LPJ_P0078363	105 (aa)	-	-
MGP_LPJ_T0078342	-	1203	-	MGP_LPJ_P0078342	133 (aa)	-	-
MGP_LPJ_T0078343	-	3854	-	-	- (aa)	-	-
MGP_LPJ_T0078340	-	4420	-	-	- (aa)	-	-
MGP_LPJ_T0078341	-	612	-	-	- (aa)	-	-
MGP_LPJ_T0078346	-	1290	-	MGP_LPJ_P0078346	93 (aa)	-	-
MGP_LPJ_T0078347	-	797	-	-	- (aa)	-	-
MGP_LPJ_T0078344	-	3129	-	MGP_LPJ_P0078344	375 (aa)	-	-
MGP_LPJ_T0078345	-	1444	-	MGP_LPJ_P0078345	285 (aa)	-	-
MGP_LPJ_T0078348	-	4325	-	MGP_LPJ_P0078348	212 (aa)	-	-
MGP_LPJ_T0078349	-	1178	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0030871	Tia1	80	37.778	MGP_LPJ_G0017398	Cirbp	91	35.714
MGP_LPJ_G0030871	Tia1	88	34.568	MGP_LPJ_G0017472	Celf5	89	32.184
MGP_LPJ_G0030871	Tia1	78	36.000	MGP_LPJ_G0022627	Ncbp2	51	36.000
MGP_LPJ_G0030871	Tia1	77	35.870	MGP_LPJ_G0027551	Rbm8a	54	35.870
MGP_LPJ_G0030871	Tia1	93	38.667	MGP_LPJ_G0027482	Celf3	76	38.462
MGP_LPJ_G0030871	Tia1	96	36.905	MGP_LPJ_G0023047	Pabpc6	58	36.905
MGP_LPJ_G0030871	Tia1	97	86.992	MGP_LPJ_G0032999	Tial1	100	87.440
MGP_LPJ_G0030871	Tia1	85	36.000	MGP_LPJ_G0034798	Celf6	62	32.955
MGP_LPJ_G0030871	Tia1	80	34.043	MGP_LPJ_G0035637	Rbmx	98	34.409
MGP_LPJ_G0030871	Tia1	98	31.169	MGP_LPJ_G0034372	Elavl3	90	37.179
MGP_LPJ_G0030871	Tia1	95	33.835	MGP_LPJ_G0024286	Pabpc2	57	35.443
MGP_LPJ_G0030871	Tia1	99	31.579	MGP_LPJ_G0033249	Elavl1	95	32.298
MGP_LPJ_G0030871	Tia1	84	34.247	MGP_LPJ_G0035943	Pabpc5	93	33.333
MGP_LPJ_G0030871	Tia1	87	38.095	MGP_LPJ_G0026769	Pabpc1l	59	38.095
MGP_LPJ_G0030871	Tia1	70	41.333	MGP_LPJ_G0035427	Rbm3	99	35.955
MGP_LPJ_G0030871	Tia1	83	35.443	MGP_LPJ_G0025262	Celf2	51	35.443
MGP_LPJ_G0030871	Tia1	95	30.000	MGP_LPJ_G0027128	Pabpc4l	95	30.539
MGP_LPJ_G0030871	Tia1	60	31.285	MGP_LPJ_G0028780	Trnau1ap	79	30.198
MGP_LPJ_G0030871	Tia1	89	34.615	MGP_LPJ_G0028358	Elavl2	96	34.615
MGP_LPJ_G0030871	Tia1	98	32.895	MGP_LPJ_G0028490	Elavl4	94	35.897
MGP_LPJ_G0030871	Tia1	87	38.095	MGP_LPJ_G0021700	Pabpc1	57	38.095
MGP_LPJ_G0030871	Tia1	87	32.911	MGP_LPJ_G0024123	Celf4	63	30.682