EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0030901 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 57109 bases
Position: chr6:89396541-89453649
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0078498	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_LPJ_P0078499	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_LPJ_P0078497	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0078497	-	424	-	MGP_LPJ_P0078497	88 (aa)	-	P51150
MGP_LPJ_T0078498	-	864	-	MGP_LPJ_P0078498	207 (aa)	-	-
MGP_LPJ_T0078499	-	550	-	MGP_LPJ_P0078499	98 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0030901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0030901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0030901	Rab7	92	46.667	MGP_LPJ_G0026893	Rab22a	82	40.854
MGP_LPJ_G0030901	Rab7	94	35.870	MGP_LPJ_G0019466	Dnajc27	60	36.145
MGP_LPJ_G0030901	Rab7	91	46.067	MGP_LPJ_G0021198	Rab2b	91	36.634
MGP_LPJ_G0030901	Rab7	94	49.462	MGP_LPJ_G0019273	Rab37	76	41.071
MGP_LPJ_G0030901	Rab7	91	47.191	MGP_LPJ_G0032482	Rab6a	94	36.000
MGP_LPJ_G0030901	Rab7	95	59.140	MGP_LPJ_G0036162	Rab9	88	54.237
MGP_LPJ_G0030901	Rab7	93	42.857	MGP_LPJ_G0023444	Rab11b	72	40.491
MGP_LPJ_G0030901	Rab7	91	40.449	MGP_LPJ_G0022141	Rabl2	71	33.735
MGP_LPJ_G0030901	Rab7	97	35.789	MGP_LPJ_G0031491	Rasl2-9	75	33.728
MGP_LPJ_G0030901	Rab7	83	35.714	MGP_LPJ_G0019111	Arl4d	58	32.520
MGP_LPJ_G0030901	Rab7	92	42.222	MGP_LPJ_G0032422	Rab30	88	38.043
MGP_LPJ_G0030901	Rab7	91	43.820	MGP_LPJ_G0025581	Rab14	83	40.310
MGP_LPJ_G0030901	Rab7	91	44.944	MGP_LPJ_G0027965	Rab2a	84	36.269
MGP_LPJ_G0030901	Rab7	73	33.113	MGP_LPJ_G0027615	Nras	95	33.108
MGP_LPJ_G0030901	Rab7	91	46.067	MGP_LPJ_G0029876	Rab35	95	34.872
MGP_LPJ_G0030901	Rab7	66	32.117	MGP_LPJ_G0033130	Hras	96	30.808
MGP_LPJ_G0030901	Rab7	92	47.778	MGP_LPJ_G0023888	Rab31	82	44.512
MGP_LPJ_G0030901	Rab7	91	42.222	MGP_LPJ_G0035583	Rab33a	85	36.111
MGP_LPJ_G0030901	Rab7	99	40.206	MGP_LPJ_G0019767	Rab15	81	33.520
MGP_LPJ_G0030901	Rab7	91	47.191	MGP_LPJ_G0035082	Rab6b	94	36.683
MGP_LPJ_G0030901	Rab7	79	31.169	MGP_LPJ_G0035059	Mras	80	33.333
MGP_LPJ_G0030901	Rab7	90	48.864	MGP_LPJ_G0023897	Rab12	64	36.316
MGP_LPJ_G0030901	Rab7	91	37.778	MGP_LPJ_G0035754	Rab39b	76	34.545
MGP_LPJ_G0030901	Rab7	98	38.542	MGP_LPJ_G0024612	Rab1b	97	34.848
MGP_LPJ_G0030901	Rab7	92	43.333	MGP_LPJ_G0017261	Rab36	63	36.571
MGP_LPJ_G0030901	Rab7	90	47.727	MGP_LPJ_G0019068	Rab5c	77	42.442
MGP_LPJ_G0030901	Rab7	98	39.583	MGP_LPJ_G0017974	Rab1a	78	39.264
MGP_LPJ_G0030901	Rab7	100	37.374	MGP_LPJ_G0027136	Rab33b	79	36.559
MGP_LPJ_G0030901	Rab7	76	33.121	MGP_LPJ_G0031384	Kras	87	33.929
MGP_LPJ_G0030901	Rab7	91	44.944	MGP_LPJ_G0027336	Rab25	75	39.157
MGP_LPJ_G0030901	Rab7	97	45.263	MGP_LPJ_G0023797	Rab5a	81	40.782
MGP_LPJ_G0030901	Rab7	93	42.857	MGP_LPJ_G0034839	Rab11a	87	38.686
MGP_LPJ_G0030901	Rab7	90	48.864	MGP_LPJ_G0024045	Rab18	92	36.082
MGP_LPJ_G0030901	Rab7	94	43.478	MGP_LPJ_G0015816	Rab23	70	33.918
MGP_LPJ_G0030901	Rab7	98	60.417	MGP_LPJ_G0036012	Rab9b	99	53.202