EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0030948 (Gene tree)
Gene ID: -
Gene Symbol: Lsm3
Alias: 1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2
Full Name: LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 6702 bases
Position: chr6:93070587-93077288
Accession: 1914928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0078710	LSM	PF01423.22	8.4e-20	1	1
MGP_LPJ_P0078714	LSM	PF01423.22	8.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0078714	-	618	-	MGP_LPJ_P0078714	102 (aa)	-	-
MGP_LPJ_T0078711	-	520	-	-	- (aa)	-	-
MGP_LPJ_T0078710	-	743	-	MGP_LPJ_P0078710	102 (aa)	-	P62311
MGP_LPJ_T0078713	-	504	-	-	- (aa)	-	-
MGP_LPJ_T0078712	-	2030	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0030948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0030948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0030948	Lsm3	74	34.667	MGP_LPJ_G0030682	Lsm5	82	34.667