EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0031021 (Gene tree)
Gene ID: -
Gene Symbol: Rpusd3
Alias: AI527266
Full Name: RNA pseudouridylate synthase domain containing 3
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 3994 bases
Position: chr6:115971089-115975082
Accession: 2141440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0079103	PseudoU_synth_2	PF00849.22	3.6e-18	1	1
MGP_LPJ_P0079102	PseudoU_synth_2	PF00849.22	5.4e-18	1	1
MGP_LPJ_P0079100	PseudoU_synth_2	PF00849.22	6.7e-18	1	1
MGP_LPJ_P0079105	PseudoU_synth_2	PF00849.22	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0079108	-	752	-	-	- (aa)	-	-
MGP_LPJ_T0079103	-	805	-	MGP_LPJ_P0079103	268 (aa)	-	-
MGP_LPJ_T0079102	-	1045	-	MGP_LPJ_P0079102	315 (aa)	-	-
MGP_LPJ_T0079101	-	321	-	-	- (aa)	-	-
MGP_LPJ_T0079100	-	1228	XM_006505227	MGP_LPJ_P0079100	344 (aa)	XP_006505290	Q14AI6
MGP_LPJ_T0079107	-	365	-	MGP_LPJ_P0079107	117 (aa)	-	-
MGP_LPJ_T0079106	-	522	-	-	- (aa)	-	-
MGP_LPJ_T0079105	-	549	-	MGP_LPJ_P0079105	182 (aa)	-	-
MGP_LPJ_T0079104	-	782	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

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Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0031021	Rpusd3	78	34.397	MGP_LPJ_G0034432	Rpusd4	70	34.397