EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_LPJ_G0031126 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_lpj
Status
putative
Strand
Minus strand
Length
24863 bases
Position
chr6:125826378-125851240
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_LPJ_P0079689APOBEC_NPF08210.118.3e-3011
MGP_LPJ_P0079690APOBEC_NPF08210.118.3e-3011
MGP_LPJ_P0079691APOBEC_NPF08210.118.3e-3011
MGP_LPJ_P0079692APOBEC_NPF08210.114.2e-1711
MGP_LPJ_P0079693APOBEC_NPF08210.113.1e-1311
MGP_LPJ_P0079689APOBEC_CPF05240.141.8e-2211
MGP_LPJ_P0079690APOBEC_CPF05240.141.8e-2211
MGP_LPJ_P0079691APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_LPJ_T0079689-2265XM_006505401MGP_LPJ_P0079689229 (aa)XP_006505464P51908
MGP_LPJ_T0079697-520--- (aa)--
MGP_LPJ_T0079696-560--- (aa)--
MGP_LPJ_T0079695-360-MGP_LPJ_P007969525 (aa)--
MGP_LPJ_T0079694-372-MGP_LPJ_P007969443 (aa)--
MGP_LPJ_T0079693-775-MGP_LPJ_P0079693113 (aa)--
MGP_LPJ_T0079692-666-MGP_LPJ_P0079692121 (aa)--
MGP_LPJ_T0079691-2127-MGP_LPJ_P0079691229 (aa)--
MGP_LPJ_T0079690-2072-MGP_LPJ_P0079690229 (aa)--
Gene Model
Click here to download MGP_LPJ_G0031126's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0031126's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_LPJ_G0031126Apobec15639.706MGP_LPJ_G0031125Aicda5341.509
MGP_LPJ_G0031126Apobec17434.737MGP_LPJ_G0021989Apobec38438.028

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us