EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0031482 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 3754 bases
Position: chr7:2089632-2093385
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	1	8
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	2	8
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	3	8
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	4	8
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	5	8
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	6	8
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	7	8
MGP_LPJ_P0081237	zf-C2H2	PF00096.26	2.7e-46	8	8
MGP_LPJ_P0081237	zf-met	PF12874.7	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0081237	-	2271	-	MGP_LPJ_P0081237	756 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0031482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0031482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0031482	-	73	30.796	MGP_LPJ_G0023165	Zscan10	74	41.818
MGP_LPJ_G0031482	-	68	36.486	MGP_LPJ_G0018163	Zfp454	66	48.148
MGP_LPJ_G0031482	-	66	44.643	MGP_LPJ_G0024520	Zfp236	68	44.643
MGP_LPJ_G0031482	-	66	31.343	MGP_LPJ_G0031892	Zfp420	95	30.691
MGP_LPJ_G0031482	-	69	35.616	MGP_LPJ_G0031827	-	86	43.860
MGP_LPJ_G0031482	-	66	42.593	MGP_LPJ_G0031478	Zfp579	75	41.379
MGP_LPJ_G0031482	-	99	100.000	MGP_LPJ_G0031481	Zfp865	99	100.000
MGP_LPJ_G0031482	-	66	31.675	MGP_LPJ_G0021915	Zfp251	63	37.278
MGP_LPJ_G0031482	-	71	30.072	MGP_LPJ_G0033890	Zfp319	87	38.835