EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0031724 (Gene tree)
Gene ID: -
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 8191 bases
Position: chr7:22907948-22916138
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	1	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	2	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	3	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	4	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	5	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	6	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	7	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	8	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	9	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	10	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	11	12
MGP_LPJ_P0081894	zf-C2H2	PF00096.26	2.3e-65	12	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	1	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	2	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	3	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	4	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	5	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	6	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	7	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	8	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	9	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	10	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	11	12
MGP_LPJ_P0081895	zf-C2H2	PF00096.26	2.3e-65	12	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	1	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	2	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	3	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	4	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	5	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	6	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	7	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	8	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	9	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	10	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	11	12
MGP_LPJ_P0081896	zf-C2H2	PF00096.26	2.6e-65	12	12
MGP_LPJ_P0081894	zf-met	PF12874.7	6.7e-09	1	1
MGP_LPJ_P0081895	zf-met	PF12874.7	6.7e-09	1	1
MGP_LPJ_P0081896	zf-met	PF12874.7	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0081896	-	1923	-	MGP_LPJ_P0081896	640 (aa)	-	-
MGP_LPJ_T0081894	-	2469	XM_017322371	MGP_LPJ_P0081894	635 (aa)	XP_017177860	E9Q8I5
MGP_LPJ_T0081895	-	2511	-	MGP_LPJ_P0081895	635 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0031724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0031724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0031724	Zfp108	79	55.556	MGP_LPJ_G0031892	Zfp420	99	55.556
MGP_LPJ_G0031724	Zfp108	73	36.318	MGP_LPJ_G0031756	Zfp574	73	42.105
MGP_LPJ_G0031724	Zfp108	66	40.435	MGP_LPJ_G0031481	Zfp865	78	33.032
MGP_LPJ_G0031724	Zfp108	99	47.876	MGP_LPJ_G0026401	Zfp661	97	47.876
MGP_LPJ_G0031724	Zfp108	99	50.474	MGP_LPJ_G0032013	2610021A01Rik	99	52.830
MGP_LPJ_G0031724	Zfp108	99	42.230	MGP_LPJ_G0020605	Zfp759	99	49.322
MGP_LPJ_G0031724	Zfp108	99	53.782	MGP_LPJ_G0020604	Rslcan18	79	55.814
MGP_LPJ_G0031724	Zfp108	66	38.411	MGP_LPJ_G0030735	Prdm5	68	46.154
MGP_LPJ_G0031724	Zfp108	99	63.372	MGP_LPJ_G0031719	Zfp112	99	63.372
MGP_LPJ_G0031724	Zfp108	66	48.077	MGP_LPJ_G0029407	Zbtb49	59	49.296
MGP_LPJ_G0031724	Zfp108	100	47.294	MGP_LPJ_G0034316	Zfp26	90	47.357
MGP_LPJ_G0031724	Zfp108	100	41.972	MGP_LPJ_G0033673	Zfp882	99	41.972
MGP_LPJ_G0031724	Zfp108	99	49.631	MGP_LPJ_G0021915	Zfp251	95	50.137
MGP_LPJ_G0031724	Zfp108	66	44.207	MGP_LPJ_G0028959	Zbtb17	56	44.207
MGP_LPJ_G0031724	Zfp108	71	45.299	MGP_LPJ_G0032952	E430018J23Rik	62	45.299
MGP_LPJ_G0031724	Zfp108	79	54.348	MGP_LPJ_G0032020	Zfp715	66	59.524
MGP_LPJ_G0031724	Zfp108	99	47.230	MGP_LPJ_G0023139	Zfp677	98	47.230
MGP_LPJ_G0031724	Zfp108	99	50.836	MGP_LPJ_G0018163	Zfp454	98	50.836
MGP_LPJ_G0031724	Zfp108	99	47.606	MGP_LPJ_G0023141	Zfp51	94	47.754
MGP_LPJ_G0031724	Zfp108	67	53.448	MGP_LPJ_G0031076	Zfp637	78	50.521
MGP_LPJ_G0031724	Zfp108	58	45.000	MGP_LPJ_G0024520	Zfp236	65	44.643
MGP_LPJ_G0031724	Zfp108	73	41.329	MGP_LPJ_G0033890	Zfp319	91	37.164
MGP_LPJ_G0031724	Zfp108	69	53.957	MGP_LPJ_G0032949	Zfp768	51	53.521
MGP_LPJ_G0031724	Zfp108	99	39.957	MGP_LPJ_G0026827	Zfp334	83	54.762
MGP_LPJ_G0031724	Zfp108	99	52.090	MGP_LPJ_G0032019	Zfp141	98	49.856
MGP_LPJ_G0031724	Zfp108	70	34.565	MGP_LPJ_G0026864	Zfp64	73	35.093
MGP_LPJ_G0031724	Zfp108	75	35.854	MGP_LPJ_G0030603	Repin1	94	36.098
MGP_LPJ_G0031724	Zfp108	99	50.201	MGP_LPJ_G0031725	Zfp61	99	50.201
MGP_LPJ_G0031724	Zfp108	99	58.333	MGP_LPJ_G0031726	Zfp94	97	58.333
MGP_LPJ_G0031724	Zfp108	69	48.077	MGP_LPJ_G0031473	Zfp628	62	49.102
MGP_LPJ_G0031724	Zfp108	71	47.727	MGP_LPJ_G0018308	Zfp867	96	53.659
MGP_LPJ_G0031724	Zfp108	59	42.194	MGP_LPJ_G0023165	Zscan10	78	39.617
MGP_LPJ_G0031724	Zfp108	100	43.458	MGP_LPJ_G0023161	Zfp945	99	43.458
MGP_LPJ_G0031724	Zfp108	99	50.862	MGP_LPJ_G0034047	Zfp1	100	49.035
MGP_LPJ_G0031724	Zfp108	68	46.711	MGP_LPJ_G0031827	-	87	46.711
MGP_LPJ_G0031724	Zfp108	69	46.352	MGP_LPJ_G0018260	Zfp672	99	41.250
MGP_LPJ_G0031724	Zfp108	69	47.863	MGP_LPJ_G0029744	Gfi1	100	50.427