EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0031731 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 23861 bases
Position: chr7:23104112-23127972
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0081926	MMR_HSR1	PF01926.23	6.4e-06	1	1
MGP_LPJ_P0081927	MMR_HSR1	PF01926.23	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0081928	-	383	-	MGP_LPJ_P0081928	82 (aa)	-	-
MGP_LPJ_T0081929	-	659	-	-	- (aa)	-	-
MGP_LPJ_T0081926	-	1835	XM_006539708	MGP_LPJ_P0081926	463 (aa)	XP_006539771	A0A0U1RQ16
MGP_LPJ_T0081927	-	1737	-	MGP_LPJ_P0081927	463 (aa)	-	-
MGP_LPJ_T0081930	-	344	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0031731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0031731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0031731	Irgc1	82	33.947	MGP_LPJ_G0024377	F830016B08Rik	88	33.947
MGP_LPJ_G0031731	Irgc1	68	37.224	MGP_LPJ_G0024376	Gm4951	77	37.224
MGP_LPJ_G0031731	Irgc1	71	30.183	MGP_LPJ_G0018115	Irgm1	76	35.169
MGP_LPJ_G0031731	Irgc1	70	37.855	MGP_LPJ_G0018117	Gm12185	80	37.855
MGP_LPJ_G0031731	Irgc1	62	32.872	MGP_LPJ_G0018257	Irgm2	69	32.872
MGP_LPJ_G0031731	Irgc1	65	34.106	MGP_LPJ_G0018256	Igtp	68	34.106
MGP_LPJ_G0031731	Irgc1	68	40.196	MGP_LPJ_G0018116	Gm5431	67	40.196
MGP_LPJ_G0031731	Irgc1	68	41.401	MGP_LPJ_G0018124	Ifi47	75	41.401
MGP_LPJ_G0031731	Irgc1	82	34.987	MGP_LPJ_G0018123	Tgtp2	89	34.987
MGP_LPJ_G0031731	Irgc1	82	34.987	MGP_LPJ_G0018122	Tgtp1	89	34.987