EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0031864 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 13694 bases
Position: chr7:27980241-27993934
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0082431	RRM_5	PF13893.6	2.4e-60	1	2
MGP_LPJ_P0082431	RRM_5	PF13893.6	2.4e-60	2	2
MGP_LPJ_P0082435	RRM_5	PF13893.6	2.4e-60	1	2
MGP_LPJ_P0082435	RRM_5	PF13893.6	2.4e-60	2	2
MGP_LPJ_P0082436	RRM_5	PF13893.6	2.9e-60	1	2
MGP_LPJ_P0082436	RRM_5	PF13893.6	2.9e-60	2	2
MGP_LPJ_P0082433	RRM_5	PF13893.6	1.9e-59	1	2
MGP_LPJ_P0082433	RRM_5	PF13893.6	1.9e-59	2	2
MGP_LPJ_P0082431	RRM_1	PF00076.22	3.3e-22	1	2
MGP_LPJ_P0082431	RRM_1	PF00076.22	3.3e-22	2	2
MGP_LPJ_P0082435	RRM_1	PF00076.22	3.3e-22	1	2
MGP_LPJ_P0082435	RRM_1	PF00076.22	3.3e-22	2	2
MGP_LPJ_P0082436	RRM_1	PF00076.22	4.2e-22	1	2
MGP_LPJ_P0082436	RRM_1	PF00076.22	4.2e-22	2	2
MGP_LPJ_P0082433	RRM_1	PF00076.22	1.6e-16	1	1
MGP_LPJ_P0082434	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0082443	-	672	-	-	- (aa)	-	-
MGP_LPJ_T0082440	-	643	-	-	- (aa)	-	-
MGP_LPJ_T0082441	-	1087	-	-	- (aa)	-	-
MGP_LPJ_T0082439	-	504	-	-	- (aa)	-	-
MGP_LPJ_T0082438	-	1850	-	MGP_LPJ_P0082438	201 (aa)	-	-
MGP_LPJ_T0082442	-	768	-	-	- (aa)	-	-
MGP_LPJ_T0082431	-	2679	XM_006539556	MGP_LPJ_P0082431	586 (aa)	XP_006539619	Q8R081
MGP_LPJ_T0082433	-	1898	-	MGP_LPJ_P0082433	456 (aa)	-	-
MGP_LPJ_T0082432	-	2275	-	-	- (aa)	-	-
MGP_LPJ_T0082435	-	2142	-	MGP_LPJ_P0082435	586 (aa)	-	-
MGP_LPJ_T0082434	-	502	-	MGP_LPJ_P0082434	112 (aa)	-	-
MGP_LPJ_T0082437	-	2426	-	-	- (aa)	-	-
MGP_LPJ_T0082436	-	2180	-	MGP_LPJ_P0082436	614 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0031864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0031864	Hnrnpl	77	30.645	MGP_LPJ_G0027753	Ptbp2	77	30.645
MGP_LPJ_G0031864	Hnrnpl	100	63.393	MGP_LPJ_G0023964	Hnrnpll	80	58.065
MGP_LPJ_G0031864	Hnrnpl	55	36.207	MGP_LPJ_G0028251	Ptbp3	83	35.537
MGP_LPJ_G0031864	Hnrnpl	95	30.045	MGP_LPJ_G0017375	Ptbp1	80	30.583