EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0031874 (Gene tree)
Gene ID: -
Gene Symbol: Fam98c
Alias: 1110006G06Rik|AI836081|AV026483|B230110F21Rik
Full Name: family with sequence similarity 98%2C member C
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 3724 bases
Position: chr7:28351164-28354887
Accession: 1921083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0082491	DUF2465	PF10239.9	8e-92	1	1
MGP_LPJ_P0082498	DUF2465	PF10239.9	9.5e-66	1	1
MGP_LPJ_P0082496	DUF2465	PF10239.9	4.6e-52	1	3
MGP_LPJ_P0082496	DUF2465	PF10239.9	4.6e-52	2	3
MGP_LPJ_P0082496	DUF2465	PF10239.9	4.6e-52	3	3
MGP_LPJ_P0082497	DUF2465	PF10239.9	1.9e-49	1	2
MGP_LPJ_P0082497	DUF2465	PF10239.9	1.9e-49	2	2
MGP_LPJ_P0082495	DUF2465	PF10239.9	7e-49	1	1
MGP_LPJ_P0082499	DUF2465	PF10239.9	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0082499	-	405	-	MGP_LPJ_P0082499	135 (aa)	-	-
MGP_LPJ_T0082498	-	884	-	MGP_LPJ_P0082498	273 (aa)	-	-
MGP_LPJ_T0082493	-	1359	-	-	- (aa)	-	-
MGP_LPJ_T0082492	-	2169	-	-	- (aa)	-	-
MGP_LPJ_T0082491	-	1268	XM_006540393	MGP_LPJ_P0082491	344 (aa)	XP_006540456	D3Z100
MGP_LPJ_T0082497	-	791	-	MGP_LPJ_P0082497	212 (aa)	-	-
MGP_LPJ_T0082496	-	964	-	MGP_LPJ_P0082496	258 (aa)	-	-
MGP_LPJ_T0082495	-	1189	-	MGP_LPJ_P0082495	142 (aa)	-	-
MGP_LPJ_T0082494	-	1632	-	-	- (aa)	-	-
MGP_LPJ_T0082500	-	781	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0031874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0031874	Fam98c	94	36.047	MGP_LPJ_G0023944	Fam98a	61	39.450
MGP_LPJ_G0031874	Fam98c	97	31.655	MGP_LPJ_G0026245	Fam98b	79	36.103