EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0031892 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 16809 bases
Position: chr7:29134149-29150957
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_LPJ_P0082564	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_LPJ_P0082567	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_LPJ_P0082564	zf-met	PF12874.7	8.3e-08	1	1
MGP_LPJ_P0082567	zf-met	PF12874.7	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0082567	-	2744	-	MGP_LPJ_P0082567	578 (aa)	-	-
MGP_LPJ_T0082566	-	2976	-	-	- (aa)	-	-
MGP_LPJ_T0082565	-	689	-	-	- (aa)	-	-
MGP_LPJ_T0082564	-	2537	XM_006539873	MGP_LPJ_P0082564	578 (aa)	XP_006539936	Q7TMN8
MGP_LPJ_T0082568	-	764	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0031892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0031892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0031892	Zfp420	99	49.675	MGP_LPJ_G0020605	Zfp759	90	50.185
MGP_LPJ_G0031892	Zfp420	98	55.870	MGP_LPJ_G0020604	Rslcan18	71	55.870
MGP_LPJ_G0031892	Zfp420	99	47.059	MGP_LPJ_G0024520	Zfp236	80	46.512
MGP_LPJ_G0031892	Zfp420	98	47.967	MGP_LPJ_G0032952	E430018J23Rik	67	47.967
MGP_LPJ_G0031892	Zfp420	98	48.744	MGP_LPJ_G0029407	Zbtb49	89	50.000
MGP_LPJ_G0031892	Zfp420	99	53.722	MGP_LPJ_G0031719	Zfp112	59	53.722
MGP_LPJ_G0031892	Zfp420	97	44.706	MGP_LPJ_G0028959	Zbtb17	69	44.706
MGP_LPJ_G0031892	Zfp420	99	52.489	MGP_LPJ_G0026827	Zfp334	75	51.487
MGP_LPJ_G0031892	Zfp420	99	56.115	MGP_LPJ_G0032949	Zfp768	51	56.071
MGP_LPJ_G0031892	Zfp420	98	59.532	MGP_LPJ_G0018163	Zfp454	71	57.803
MGP_LPJ_G0031892	Zfp420	98	55.210	MGP_LPJ_G0023141	Zfp51	88	55.210
MGP_LPJ_G0031892	Zfp420	98	38.136	MGP_LPJ_G0031473	Zfp628	60	38.748
MGP_LPJ_G0031892	Zfp420	97	56.897	MGP_LPJ_G0031076	Zfp637	75	54.167
MGP_LPJ_G0031892	Zfp420	99	59.854	MGP_LPJ_G0032013	2610021A01Rik	74	59.854
MGP_LPJ_G0031892	Zfp420	98	51.882	MGP_LPJ_G0018308	Zfp867	82	51.882
MGP_LPJ_G0031892	Zfp420	99	51.671	MGP_LPJ_G0031827	-	87	51.671
MGP_LPJ_G0031892	Zfp420	95	59.426	MGP_LPJ_G0026401	Zfp661	72	59.426
MGP_LPJ_G0031892	Zfp420	98	48.507	MGP_LPJ_G0029744	Gfi1	100	48.507
MGP_LPJ_G0031892	Zfp420	98	37.309	MGP_LPJ_G0033890	Zfp319	93	36.919
MGP_LPJ_G0031892	Zfp420	98	50.000	MGP_LPJ_G0033673	Zfp882	85	50.000
MGP_LPJ_G0031892	Zfp420	99	55.556	MGP_LPJ_G0031724	Zfp108	79	55.556
MGP_LPJ_G0031892	Zfp420	99	55.310	MGP_LPJ_G0031725	Zfp61	59	55.310
MGP_LPJ_G0031892	Zfp420	99	57.095	MGP_LPJ_G0031726	Zfp94	78	57.095
MGP_LPJ_G0031892	Zfp420	99	50.270	MGP_LPJ_G0023161	Zfp945	98	51.032
MGP_LPJ_G0031892	Zfp420	97	41.080	MGP_LPJ_G0023165	Zscan10	78	40.179
MGP_LPJ_G0031892	Zfp420	99	55.773	MGP_LPJ_G0034316	Zfp26	80	55.773
MGP_LPJ_G0031892	Zfp420	98	57.678	MGP_LPJ_G0032019	Zfp141	73	57.678
MGP_LPJ_G0031892	Zfp420	98	46.711	MGP_LPJ_G0030603	Repin1	93	46.711
MGP_LPJ_G0031892	Zfp420	98	54.648	MGP_LPJ_G0023139	Zfp677	89	54.648
MGP_LPJ_G0031892	Zfp420	99	51.052	MGP_LPJ_G0032020	Zfp715	71	51.316
MGP_LPJ_G0031892	Zfp420	99	60.656	MGP_LPJ_G0021915	Zfp251	78	60.656
MGP_LPJ_G0031892	Zfp420	98	49.524	MGP_LPJ_G0018260	Zfp672	89	49.524
MGP_LPJ_G0031892	Zfp420	95	41.722	MGP_LPJ_G0030735	Prdm5	91	48.387
MGP_LPJ_G0031892	Zfp420	98	39.286	MGP_LPJ_G0026864	Zfp64	69	36.504
MGP_LPJ_G0031892	Zfp420	99	36.677	MGP_LPJ_G0031756	Zfp574	93	37.533
MGP_LPJ_G0031892	Zfp420	99	37.634	MGP_LPJ_G0031481	Zfp865	80	37.634
MGP_LPJ_G0031892	Zfp420	95	30.691	MGP_LPJ_G0031482	-	66	31.343
MGP_LPJ_G0031892	Zfp420	99	57.692	MGP_LPJ_G0034047	Zfp1	78	57.692