EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032013 (Gene tree)
Gene ID: -
Gene Symbol: 2610021A01Rik
Alias: -
Full Name: RIKEN cDNA 2610021A01 gene
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 32946 bases
Position: chr7:41871899-41904844
Accession: 1922662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	1	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	2	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	3	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	4	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	5	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	6	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	7	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	8	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	9	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	10	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	11	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	12	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	13	14
MGP_LPJ_P0083151	zf-C2H2	PF00096.26	1.6e-78	14	14
MGP_LPJ_P0083151	zf-met	PF12874.7	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0083155	-	532	-	-	- (aa)	-	-
MGP_LPJ_T0083154	-	574	-	-	- (aa)	-	-
MGP_LPJ_T0083151	-	4004	-	MGP_LPJ_P0083151	834 (aa)	-	-
MGP_LPJ_T0083150	-	514	-	-	- (aa)	-	-
MGP_LPJ_T0083153	-	594	-	MGP_LPJ_P0083153	71 (aa)	-	-
MGP_LPJ_T0083152	-	309	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0032013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032013	2610021A01Rik	56	48.276	MGP_LPJ_G0029744	Gfi1	100	50.467
MGP_LPJ_G0032013	2610021A01Rik	72	68.750	MGP_LPJ_G0023139	Zfp677	93	68.750
MGP_LPJ_G0032013	2610021A01Rik	70	55.556	MGP_LPJ_G0018163	Zfp454	99	50.565
MGP_LPJ_G0032013	2610021A01Rik	76	54.949	MGP_LPJ_G0021915	Zfp251	87	54.949
MGP_LPJ_G0032013	2610021A01Rik	78	84.043	MGP_LPJ_G0032019	Zfp141	91	84.043
MGP_LPJ_G0032013	2610021A01Rik	99	52.830	MGP_LPJ_G0031724	Zfp108	99	50.474
MGP_LPJ_G0032013	2610021A01Rik	61	46.565	MGP_LPJ_G0032952	E430018J23Rik	79	46.565
MGP_LPJ_G0032013	2610021A01Rik	58	36.034	MGP_LPJ_G0030603	Repin1	93	38.058
MGP_LPJ_G0032013	2610021A01Rik	73	50.000	MGP_LPJ_G0032020	Zfp715	78	50.000
MGP_LPJ_G0032013	2610021A01Rik	58	54.182	MGP_LPJ_G0032949	Zfp768	51	53.571
MGP_LPJ_G0032013	2610021A01Rik	63	44.280	MGP_LPJ_G0031827	-	91	44.072
MGP_LPJ_G0032013	2610021A01Rik	94	66.667	MGP_LPJ_G0023141	Zfp51	97	66.667
MGP_LPJ_G0032013	2610021A01Rik	87	72.500	MGP_LPJ_G0023161	Zfp945	91	72.500
MGP_LPJ_G0032013	2610021A01Rik	64	42.342	MGP_LPJ_G0023165	Zscan10	80	42.342
MGP_LPJ_G0032013	2610021A01Rik	56	46.429	MGP_LPJ_G0024520	Zfp236	66	46.429
MGP_LPJ_G0032013	2610021A01Rik	54	47.260	MGP_LPJ_G0028959	Zbtb17	58	47.260
MGP_LPJ_G0032013	2610021A01Rik	56	43.041	MGP_LPJ_G0018260	Zfp672	90	43.750
MGP_LPJ_G0032013	2610021A01Rik	56	39.057	MGP_LPJ_G0030735	Prdm5	76	39.057
MGP_LPJ_G0032013	2610021A01Rik	55	31.004	MGP_LPJ_G0031481	Zfp865	78	33.333
MGP_LPJ_G0032013	2610021A01Rik	56	37.377	MGP_LPJ_G0016471	Zbtb41	59	36.939
MGP_LPJ_G0032013	2610021A01Rik	85	54.237	MGP_LPJ_G0020605	Zfp759	99	54.237
MGP_LPJ_G0032013	2610021A01Rik	56	49.223	MGP_LPJ_G0029407	Zbtb49	62	51.389
MGP_LPJ_G0032013	2610021A01Rik	70	49.299	MGP_LPJ_G0031719	Zfp112	75	49.686
MGP_LPJ_G0032013	2610021A01Rik	69	60.976	MGP_LPJ_G0031726	Zfp94	93	60.976
MGP_LPJ_G0032013	2610021A01Rik	62	50.000	MGP_LPJ_G0031179	Zfp384	50	50.000
MGP_LPJ_G0032013	2610021A01Rik	63	37.744	MGP_LPJ_G0033890	Zfp319	94	37.662
MGP_LPJ_G0032013	2610021A01Rik	63	49.220	MGP_LPJ_G0033673	Zfp882	93	49.220
MGP_LPJ_G0032013	2610021A01Rik	63	38.757	MGP_LPJ_G0026864	Zfp64	69	38.757
MGP_LPJ_G0032013	2610021A01Rik	54	34.615	MGP_LPJ_G0031473	Zfp628	60	35.055
MGP_LPJ_G0032013	2610021A01Rik	63	55.172	MGP_LPJ_G0031076	Zfp637	78	59.322
MGP_LPJ_G0032013	2610021A01Rik	70	51.244	MGP_LPJ_G0031725	Zfp61	71	51.244
MGP_LPJ_G0032013	2610021A01Rik	74	59.854	MGP_LPJ_G0031892	Zfp420	99	59.854
MGP_LPJ_G0032013	2610021A01Rik	70	56.897	MGP_LPJ_G0020604	Rslcan18	77	56.897
MGP_LPJ_G0032013	2610021A01Rik	78	59.091	MGP_LPJ_G0034047	Zfp1	99	59.091
MGP_LPJ_G0032013	2610021A01Rik	71	55.000	MGP_LPJ_G0018308	Zfp867	90	55.000
MGP_LPJ_G0032013	2610021A01Rik	65	53.279	MGP_LPJ_G0026401	Zfp661	87	53.279
MGP_LPJ_G0032013	2610021A01Rik	54	38.000	MGP_LPJ_G0031756	Zfp574	71	38.000
MGP_LPJ_G0032013	2610021A01Rik	65	51.471	MGP_LPJ_G0026827	Zfp334	80	51.471
MGP_LPJ_G0032013	2610021A01Rik	84	51.678	MGP_LPJ_G0034316	Zfp26	98	51.678