EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032422 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 96121 bases
Position: chr7:96550450-96646570
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0084750	MMR_HSR1	PF01926.23	2.4e-05	1	1
MGP_LPJ_P0084751	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0084752	-	1304	-	MGP_LPJ_P0084752	175 (aa)	-	-
MGP_LPJ_T0084750	-	2039	XM_006508293	MGP_LPJ_P0084750	203 (aa)	XP_006508356	Q923S9
MGP_LPJ_T0084751	-	1406	-	MGP_LPJ_P0084751	203 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0032422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032422	Rab30	77	35.625	MGP_LPJ_G0018671	Rab34	62	35.625
MGP_LPJ_G0032422	Rab30	89	34.426	MGP_LPJ_G0033130	Hras	94	34.426
MGP_LPJ_G0032422	Rab30	88	47.778	MGP_LPJ_G0023897	Rab12	62	47.778
MGP_LPJ_G0032422	Rab30	78	48.447	MGP_LPJ_G0035754	Rab39b	76	48.447
MGP_LPJ_G0032422	Rab30	97	39.524	MGP_LPJ_G0023444	Rab11b	96	39.524
MGP_LPJ_G0032422	Rab30	82	50.000	MGP_LPJ_G0024612	Rab1b	83	50.000
MGP_LPJ_G0032422	Rab30	90	42.391	MGP_LPJ_G0027965	Rab2a	87	42.391
MGP_LPJ_G0032422	Rab30	86	42.529	MGP_LPJ_G0019767	Rab15	82	42.529
MGP_LPJ_G0032422	Rab30	84	34.503	MGP_LPJ_G0027615	Nras	96	34.932
MGP_LPJ_G0032422	Rab30	87	37.500	MGP_LPJ_G0015816	Rab23	74	37.500
MGP_LPJ_G0032422	Rab30	79	39.157	MGP_LPJ_G0036012	Rab9b	82	39.157
MGP_LPJ_G0032422	Rab30	82	31.737	MGP_LPJ_G0029255	Rheb	88	31.737
MGP_LPJ_G0032422	Rab30	81	32.317	MGP_LPJ_G0031491	Rasl2-9	75	32.317
MGP_LPJ_G0032422	Rab30	79	41.615	MGP_LPJ_G0035082	Rab6b	77	41.615
MGP_LPJ_G0032422	Rab30	76	42.857	MGP_LPJ_G0023888	Rab31	79	42.857
MGP_LPJ_G0032422	Rab30	95	38.889	MGP_LPJ_G0036162	Rab9	97	38.889
MGP_LPJ_G0032422	Rab30	87	33.146	MGP_LPJ_G0031384	Kras	93	33.146
MGP_LPJ_G0032422	Rab30	81	33.735	MGP_LPJ_G0035059	Mras	79	33.735
MGP_LPJ_G0032422	Rab30	83	47.929	MGP_LPJ_G0024045	Rab18	82	47.929
MGP_LPJ_G0032422	Rab30	86	50.286	MGP_LPJ_G0029876	Rab35	86	50.286
MGP_LPJ_G0032422	Rab30	79	42.857	MGP_LPJ_G0032482	Rab6a	77	42.857
MGP_LPJ_G0032422	Rab30	84	45.614	MGP_LPJ_G0021198	Rab2b	81	48.718
MGP_LPJ_G0032422	Rab30	80	42.331	MGP_LPJ_G0026893	Rab22a	84	42.331
MGP_LPJ_G0032422	Rab30	89	40.556	MGP_LPJ_G0025581	Rab14	91	43.478
MGP_LPJ_G0032422	Rab30	86	43.678	MGP_LPJ_G0023797	Rab5a	81	43.678
MGP_LPJ_G0032422	Rab30	82	50.602	MGP_LPJ_G0017974	Rab1a	81	50.602
MGP_LPJ_G0032422	Rab30	78	38.272	MGP_LPJ_G0017261	Rab36	61	38.272
MGP_LPJ_G0032422	Rab30	88	38.043	MGP_LPJ_G0030901	Rab7	92	42.222
MGP_LPJ_G0032422	Rab30	97	41.546	MGP_LPJ_G0027336	Rab25	96	41.546
MGP_LPJ_G0032422	Rab30	97	37.981	MGP_LPJ_G0034839	Rab11a	91	44.604
MGP_LPJ_G0032422	Rab30	81	47.059	MGP_LPJ_G0027136	Rab33b	74	47.059
MGP_LPJ_G0032422	Rab30	83	42.012	MGP_LPJ_G0019068	Rab5c	78	42.012
MGP_LPJ_G0032422	Rab30	81	51.176	MGP_LPJ_G0035583	Rab33a	72	51.176
MGP_LPJ_G0032422	Rab30	79	34.756	MGP_LPJ_G0022141	Rabl2	70	34.756
MGP_LPJ_G0032422	Rab30	80	48.466	MGP_LPJ_G0019273	Rab37	75	48.466