EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032482 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 37061 bases
Position: chr7:104847842-104884902
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0085006	MMR_HSR1	PF01926.23	9.1e-05	1	1
MGP_LPJ_P0085007	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0085008	-	567	-	-	- (aa)	-	-
MGP_LPJ_T0085005	-	2613	-	MGP_LPJ_P0085005	175 (aa)	-	P35279
MGP_LPJ_T0085007	-	3106	-	MGP_LPJ_P0085007	208 (aa)	-	-
MGP_LPJ_T0085006	-	3210	-	MGP_LPJ_P0085006	208 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0032482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032482	Rab6a	95	30.151	MGP_LPJ_G0033130	Hras	98	30.151
MGP_LPJ_G0032482	Rab6a	94	36.150	MGP_LPJ_G0017261	Rab36	80	36.150
MGP_LPJ_G0032482	Rab6a	77	30.769	MGP_LPJ_G0030285	Rasl11a	69	30.769
MGP_LPJ_G0032482	Rab6a	84	44.000	MGP_LPJ_G0019068	Rab5c	81	44.000
MGP_LPJ_G0032482	Rab6a	85	37.634	MGP_LPJ_G0018671	Rab34	72	37.634
MGP_LPJ_G0032482	Rab6a	98	41.546	MGP_LPJ_G0023797	Rab5a	95	41.546
MGP_LPJ_G0032482	Rab6a	84	35.955	MGP_LPJ_G0034839	Rab11a	84	38.281
MGP_LPJ_G0032482	Rab6a	79	33.721	MGP_LPJ_G0036012	Rab9b	84	33.721
MGP_LPJ_G0032482	Rab6a	95	36.634	MGP_LPJ_G0024045	Rab18	94	36.634
MGP_LPJ_G0032482	Rab6a	76	39.873	MGP_LPJ_G0015816	Rab23	66	39.873
MGP_LPJ_G0032482	Rab6a	94	36.000	MGP_LPJ_G0030901	Rab7	91	47.191
MGP_LPJ_G0032482	Rab6a	81	39.053	MGP_LPJ_G0026893	Rab22a	87	39.053
MGP_LPJ_G0032482	Rab6a	75	35.625	MGP_LPJ_G0029255	Rheb	85	35.625
MGP_LPJ_G0032482	Rab6a	75	32.911	MGP_LPJ_G0027615	Nras	98	33.557
MGP_LPJ_G0032482	Rab6a	77	42.857	MGP_LPJ_G0019273	Rab37	75	42.857
MGP_LPJ_G0032482	Rab6a	93	35.000	MGP_LPJ_G0036162	Rab9	96	35.000
MGP_LPJ_G0032482	Rab6a	75	38.217	MGP_LPJ_G0023444	Rab11b	72	38.217
MGP_LPJ_G0032482	Rab6a	75	32.278	MGP_LPJ_G0031384	Kras	83	32.278
MGP_LPJ_G0032482	Rab6a	56	30.000	MGP_LPJ_G0019111	Arl4d	58	30.000
MGP_LPJ_G0032482	Rab6a	95	37.561	MGP_LPJ_G0035583	Rab33a	86	37.561
MGP_LPJ_G0032482	Rab6a	90	36.458	MGP_LPJ_G0019767	Rab15	91	36.458
MGP_LPJ_G0032482	Rab6a	94	36.232	MGP_LPJ_G0025581	Rab14	95	36.232
MGP_LPJ_G0032482	Rab6a	91	38.462	MGP_LPJ_G0027965	Rab2a	89	38.462
MGP_LPJ_G0032482	Rab6a	75	39.623	MGP_LPJ_G0035754	Rab39b	75	39.623
MGP_LPJ_G0032482	Rab6a	74	39.610	MGP_LPJ_G0029876	Rab35	89	35.789
MGP_LPJ_G0032482	Rab6a	77	40.828	MGP_LPJ_G0021198	Rab2b	79	43.421
MGP_LPJ_G0032482	Rab6a	80	38.922	MGP_LPJ_G0023888	Rab31	86	38.922
MGP_LPJ_G0032482	Rab6a	94	35.784	MGP_LPJ_G0027136	Rab33b	86	35.784
MGP_LPJ_G0032482	Rab6a	88	31.915	MGP_LPJ_G0022141	Rabl2	83	31.915
MGP_LPJ_G0032482	Rab6a	94	38.384	MGP_LPJ_G0017974	Rab1a	94	38.384
MGP_LPJ_G0032482	Rab6a	100	90.865	MGP_LPJ_G0035082	Rab6b	100	90.865
MGP_LPJ_G0032482	Rab6a	88	34.239	MGP_LPJ_G0027336	Rab25	86	34.239
MGP_LPJ_G0032482	Rab6a	77	42.857	MGP_LPJ_G0032422	Rab30	79	42.857
MGP_LPJ_G0032482	Rab6a	76	32.500	MGP_LPJ_G0035059	Mras	76	32.500
MGP_LPJ_G0032482	Rab6a	93	38.384	MGP_LPJ_G0024612	Rab1b	96	38.384
MGP_LPJ_G0032482	Rab6a	76	40.252	MGP_LPJ_G0023897	Rab12	55	40.252