EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032876 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 72676 bases
Position: chr7:128691504-128764179
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0086109	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_LPJ_P0086106	Ago_hook	PF10427.9	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0086114	-	3297	-	-	- (aa)	-	-
MGP_LPJ_T0086112	-	606	-	-	- (aa)	-	-
MGP_LPJ_T0086113	-	463	-	MGP_LPJ_P0086113	154 (aa)	-	-
MGP_LPJ_T0086110	-	4312	-	-	- (aa)	-	-
MGP_LPJ_T0086111	-	939	-	-	- (aa)	-	-
MGP_LPJ_T0086105	-	310	-	MGP_LPJ_P0086105	53 (aa)	-	-
MGP_LPJ_T0086104	-	640	-	-	- (aa)	-	-
MGP_LPJ_T0086107	-	3577	-	MGP_LPJ_P0086107	35 (aa)	-	-
MGP_LPJ_T0086106	-	8140	-	MGP_LPJ_P0086106	1880 (aa)	-	-
MGP_LPJ_T0086109	-	5223	-	MGP_LPJ_P0086109	1397 (aa)	-	-
MGP_LPJ_T0086108	-	1783	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0032876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032876	Tnrc6a	99	39.671	MGP_LPJ_G0022003	Tnrc6b	98	37.120
MGP_LPJ_G0032876	Tnrc6a	98	44.685	MGP_LPJ_G0019350	Tnrc6c	99	40.570