EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032943 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 18742 bases
Position: chr7:133013003-133031744
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0086517	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_LPJ_P0086516	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_LPJ_P0086514	MMR_HSR1	PF01926.23	5.1e-08	1	1
MGP_LPJ_P0086513	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0086520	-	713	-	-	- (aa)	-	-
MGP_LPJ_T0086512	-	571	-	-	- (aa)	-	-
MGP_LPJ_T0086513	-	1101	-	MGP_LPJ_P0086513	366 (aa)	-	-
MGP_LPJ_T0086516	-	706	-	MGP_LPJ_P0086516	186 (aa)	-	-
MGP_LPJ_T0086517	-	599	-	MGP_LPJ_P0086517	145 (aa)	-	-
MGP_LPJ_T0086514	-	1048	-	MGP_LPJ_P0086514	328 (aa)	-	-
MGP_LPJ_T0086515	-	789	-	-	- (aa)	-	-
MGP_LPJ_T0086518	-	821	-	-	- (aa)	-	-
MGP_LPJ_T0086519	-	242	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0032943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032943	Sept1	100	66.897	MGP_LPJ_G0018809	Sept4	94	66.514
MGP_LPJ_G0032943	Sept1	100	50.000	MGP_LPJ_G0019348	Sept9	83	46.000
MGP_LPJ_G0032943	Sept1	100	40.816	MGP_LPJ_G0029659	Sept11	76	40.762
MGP_LPJ_G0032943	Sept1	100	43.537	MGP_LPJ_G0017166	Sept10	71	40.064
MGP_LPJ_G0032943	Sept1	100	40.136	MGP_LPJ_G0035518	Sept6	79	41.349
MGP_LPJ_G0032943	Sept1	100	68.276	MGP_LPJ_G0022517	Sept5	93	63.068
MGP_LPJ_G0032943	Sept1	100	64.828	MGP_LPJ_G0016259	Sept2	100	60.748
MGP_LPJ_G0032943	Sept1	100	50.685	MGP_LPJ_G0022039	Sept3	86	46.575
MGP_LPJ_G0032943	Sept1	100	59.310	MGP_LPJ_G0034395	Sept7	76	49.709
MGP_LPJ_G0032943	Sept1	100	47.260	MGP_LPJ_G0022381	Sept12	77	43.775
MGP_LPJ_G0032943	Sept1	100	38.095	MGP_LPJ_G0018208	Sept8	76	36.765