EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032952 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 2975 bases
Position: chr7:133194519-133197493
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_LPJ_P0086539	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_LPJ_P0086539	zf-met	PF12874.7	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0086539	-	2352	XM_006507163	MGP_LPJ_P0086539	461 (aa)	XP_006507226	D3Z3V4

Gene Model

Click here to download MGP_LPJ_G0032952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032952	E430018J23Rik	62	45.000	MGP_LPJ_G0029407	Zbtb49	64	47.945
MGP_LPJ_G0032952	E430018J23Rik	86	39.583	MGP_LPJ_G0018308	Zfp867	95	39.583
MGP_LPJ_G0032952	E430018J23Rik	59	42.177	MGP_LPJ_G0024520	Zfp236	58	42.177
MGP_LPJ_G0032952	E430018J23Rik	69	36.765	MGP_LPJ_G0033890	Zfp319	93	39.245
MGP_LPJ_G0032952	E430018J23Rik	89	45.385	MGP_LPJ_G0018163	Zfp454	99	44.019
MGP_LPJ_G0032952	E430018J23Rik	60	35.593	MGP_LPJ_G0031481	Zfp865	72	35.593
MGP_LPJ_G0032952	E430018J23Rik	86	35.381	MGP_LPJ_G0034047	Zfp1	98	35.381
MGP_LPJ_G0032952	E430018J23Rik	57	44.503	MGP_LPJ_G0031076	Zfp637	84	44.330
MGP_LPJ_G0032952	E430018J23Rik	60	48.421	MGP_LPJ_G0031473	Zfp628	60	47.264
MGP_LPJ_G0032952	E430018J23Rik	89	50.000	MGP_LPJ_G0034316	Zfp26	89	50.000
MGP_LPJ_G0032952	E430018J23Rik	86	43.798	MGP_LPJ_G0033673	Zfp882	99	43.798
MGP_LPJ_G0032952	E430018J23Rik	91	47.445	MGP_LPJ_G0023141	Zfp51	95	45.339
MGP_LPJ_G0032952	E430018J23Rik	79	46.565	MGP_LPJ_G0032013	2610021A01Rik	61	46.565
MGP_LPJ_G0032952	E430018J23Rik	93	46.360	MGP_LPJ_G0032019	Zfp141	100	46.360
MGP_LPJ_G0032952	E430018J23Rik	89	47.895	MGP_LPJ_G0026401	Zfp661	94	42.286
MGP_LPJ_G0032952	E430018J23Rik	60	42.197	MGP_LPJ_G0029744	Gfi1	99	45.038
MGP_LPJ_G0032952	E430018J23Rik	61	42.798	MGP_LPJ_G0018260	Zfp672	90	42.105
MGP_LPJ_G0032952	E430018J23Rik	74	47.809	MGP_LPJ_G0031719	Zfp112	63	47.809
MGP_LPJ_G0032952	E430018J23Rik	54	38.421	MGP_LPJ_G0018891	Zfp652	51	32.808
MGP_LPJ_G0032952	E430018J23Rik	90	50.382	MGP_LPJ_G0021915	Zfp251	94	50.382
MGP_LPJ_G0032952	E430018J23Rik	57	44.086	MGP_LPJ_G0031756	Zfp574	71	38.961
MGP_LPJ_G0032952	E430018J23Rik	71	32.389	MGP_LPJ_G0026864	Zfp64	70	32.389
MGP_LPJ_G0032952	E430018J23Rik	92	42.073	MGP_LPJ_G0023161	Zfp945	98	42.073
MGP_LPJ_G0032952	E430018J23Rik	79	45.070	MGP_LPJ_G0032020	Zfp715	74	45.070
MGP_LPJ_G0032952	E430018J23Rik	87	42.510	MGP_LPJ_G0020605	Zfp759	99	42.510
MGP_LPJ_G0032952	E430018J23Rik	91	46.988	MGP_LPJ_G0020604	Rslcan18	80	46.988
MGP_LPJ_G0032952	E430018J23Rik	61	44.498	MGP_LPJ_G0030603	Repin1	92	44.076
MGP_LPJ_G0032952	E430018J23Rik	62	45.299	MGP_LPJ_G0031724	Zfp108	71	45.299
MGP_LPJ_G0032952	E430018J23Rik	59	48.341	MGP_LPJ_G0031725	Zfp61	51	48.341
MGP_LPJ_G0032952	E430018J23Rik	85	46.119	MGP_LPJ_G0031726	Zfp94	96	46.119
MGP_LPJ_G0032952	E430018J23Rik	60	47.511	MGP_LPJ_G0032949	Zfp768	50	47.321
MGP_LPJ_G0032952	E430018J23Rik	64	43.254	MGP_LPJ_G0023165	Zscan10	78	43.254
MGP_LPJ_G0032952	E430018J23Rik	86	43.600	MGP_LPJ_G0026827	Zfp334	99	43.600
MGP_LPJ_G0032952	E430018J23Rik	67	47.967	MGP_LPJ_G0031892	Zfp420	98	47.967
MGP_LPJ_G0032952	E430018J23Rik	92	41.985	MGP_LPJ_G0023139	Zfp677	99	41.985
MGP_LPJ_G0032952	E430018J23Rik	57	42.105	MGP_LPJ_G0031827	-	86	42.105
MGP_LPJ_G0032952	E430018J23Rik	71	37.838	MGP_LPJ_G0030735	Prdm5	74	37.838