EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032976 (Gene tree)
Gene ID: -
Gene Symbol: Zfp646
Alias: 6820429M01
Full Name: zinc finger protein 646
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 9776 bases
Position: chr7:133730653-133740428
Accession: 3665412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	1	8
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	2	8
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	3	8
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	4	8
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	5	8
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	6	8
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	7	8
MGP_LPJ_P0086680	zf-C2H2	PF00096.26	2.6e-73	8	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	1	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	2	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	3	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	4	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	5	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	6	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	7	8
MGP_LPJ_P0086681	zf-C2H2	PF00096.26	2.4e-67	8	8
MGP_LPJ_P0086679	zf-C2H2	PF00096.26	3.7e-35	1	7
MGP_LPJ_P0086679	zf-C2H2	PF00096.26	3.7e-35	2	7
MGP_LPJ_P0086679	zf-C2H2	PF00096.26	3.7e-35	3	7
MGP_LPJ_P0086679	zf-C2H2	PF00096.26	3.7e-35	4	7
MGP_LPJ_P0086679	zf-C2H2	PF00096.26	3.7e-35	5	7
MGP_LPJ_P0086679	zf-C2H2	PF00096.26	3.7e-35	6	7
MGP_LPJ_P0086679	zf-C2H2	PF00096.26	3.7e-35	7	7
MGP_LPJ_P0086679	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0086681	-	6682	-	MGP_LPJ_P0086681	1561 (aa)	-	-
MGP_LPJ_T0086680	-	6310	-	MGP_LPJ_P0086680	1788 (aa)	-	-
MGP_LPJ_T0086679	-	2241	-	MGP_LPJ_P0086679	512 (aa)	-	-
MGP_LPJ_T0086678	-	2296	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0032976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032976	Zfp646	90	34.940	MGP_LPJ_G0024520	Zfp236	76	34.940
MGP_LPJ_G0032976	Zfp646	79	39.326	MGP_LPJ_G0030603	Repin1	91	30.526
MGP_LPJ_G0032976	Zfp646	77	35.556	MGP_LPJ_G0031481	Zfp865	84	34.615
MGP_LPJ_G0032976	Zfp646	63	43.529	MGP_LPJ_G0031473	Zfp628	62	43.529