EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0032999 (Gene tree)
Gene ID: -
Gene Symbol: Tial1
Alias: 5330433G13Rik|AL033329|TIAR|mTIAR
Full Name: Tia1 cytotoxic granule-associated RNA binding protein-like 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 23088 bases
Position: chr7:134342522-134365609
Accession: 107913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0086791	RRM_1	PF00076.22	2.2e-63	1	3
MGP_LPJ_P0086791	RRM_1	PF00076.22	2.2e-63	2	3
MGP_LPJ_P0086791	RRM_1	PF00076.22	2.2e-63	3	3
MGP_LPJ_P0086794	RRM_1	PF00076.22	2.2e-63	1	3
MGP_LPJ_P0086794	RRM_1	PF00076.22	2.2e-63	2	3
MGP_LPJ_P0086794	RRM_1	PF00076.22	2.2e-63	3	3
MGP_LPJ_P0086788	RRM_1	PF00076.22	3.1e-60	1	3
MGP_LPJ_P0086788	RRM_1	PF00076.22	3.1e-60	2	3
MGP_LPJ_P0086788	RRM_1	PF00076.22	3.1e-60	3	3
MGP_LPJ_P0086790	RRM_1	PF00076.22	7.6e-51	1	3
MGP_LPJ_P0086790	RRM_1	PF00076.22	7.6e-51	2	3
MGP_LPJ_P0086790	RRM_1	PF00076.22	7.6e-51	3	3
MGP_LPJ_P0086796	RRM_1	PF00076.22	1.8e-26	1	2
MGP_LPJ_P0086796	RRM_1	PF00076.22	1.8e-26	2	2
MGP_LPJ_P0086793	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0086800	-	1816	-	-	- (aa)	-	-
MGP_LPJ_T0086801	-	674	-	-	- (aa)	-	-
MGP_LPJ_T0086798	-	560	-	-	- (aa)	-	-
MGP_LPJ_T0086799	-	804	-	MGP_LPJ_P0086799	140 (aa)	-	-
MGP_LPJ_T0086789	-	4269	-	-	- (aa)	-	-
MGP_LPJ_T0086788	-	4454	XM_006507570	MGP_LPJ_P0086788	392 (aa)	XP_006507633	P70318
MGP_LPJ_T0086794	-	1580	-	MGP_LPJ_P0086794	375 (aa)	-	-
MGP_LPJ_T0086795	-	2329	-	MGP_LPJ_P0086795	135 (aa)	-	-
MGP_LPJ_T0086796	-	1344	-	MGP_LPJ_P0086796	244 (aa)	-	-
MGP_LPJ_T0086797	-	784	-	MGP_LPJ_P0086797	41 (aa)	-	-
MGP_LPJ_T0086790	-	2830	-	MGP_LPJ_P0086790	336 (aa)	-	-
MGP_LPJ_T0086791	-	2033	-	MGP_LPJ_P0086791	375 (aa)	-	-
MGP_LPJ_T0086792	-	953	-	MGP_LPJ_P0086792	106 (aa)	-	-
MGP_LPJ_T0086793	-	562	-	MGP_LPJ_P0086793	107 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0032999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0032999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0032999	Tial1	69	31.469	MGP_LPJ_G0029870	Msi1	56	41.379
MGP_LPJ_G0032999	Tial1	100	87.440	MGP_LPJ_G0030871	Tia1	97	86.992
MGP_LPJ_G0032999	Tial1	73	37.179	MGP_LPJ_G0034372	Elavl3	90	37.179
MGP_LPJ_G0032999	Tial1	53	32.143	MGP_LPJ_G0034798	Celf6	54	31.818
MGP_LPJ_G0032999	Tial1	65	31.481	MGP_LPJ_G0025262	Celf2	61	34.177
MGP_LPJ_G0032999	Tial1	94	31.783	MGP_LPJ_G0023047	Pabpc6	56	34.014
MGP_LPJ_G0032999	Tial1	73	35.897	MGP_LPJ_G0028490	Elavl4	88	35.897
MGP_LPJ_G0032999	Tial1	81	31.111	MGP_LPJ_G0019372	Rbfox3	53	31.868
MGP_LPJ_G0032999	Tial1	62	32.184	MGP_LPJ_G0022627	Ncbp2	71	33.333
MGP_LPJ_G0032999	Tial1	64	31.461	MGP_LPJ_G0035637	Rbmx	90	32.258
MGP_LPJ_G0032999	Tial1	67	40.244	MGP_LPJ_G0017398	Cirbp	85	40.244
MGP_LPJ_G0032999	Tial1	73	32.000	MGP_LPJ_G0027265	Rbm46	52	30.000
MGP_LPJ_G0032999	Tial1	72	34.615	MGP_LPJ_G0028358	Elavl2	93	34.615
MGP_LPJ_G0032999	Tial1	94	31.008	MGP_LPJ_G0021700	Pabpc1	56	34.783
MGP_LPJ_G0032999	Tial1	99	31.618	MGP_LPJ_G0027128	Pabpc4l	94	33.333
MGP_LPJ_G0032999	Tial1	73	33.019	MGP_LPJ_G0028780	Trnau1ap	60	32.386
MGP_LPJ_G0032999	Tial1	92	32.500	MGP_LPJ_G0024286	Pabpc2	50	35.036
MGP_LPJ_G0032999	Tial1	67	30.769	MGP_LPJ_G0033249	Elavl1	95	30.769
MGP_LPJ_G0032999	Tial1	81	37.333	MGP_LPJ_G0027482	Celf3	70	34.091