EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0034047 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 28830 bases
Position: chr8:114596518-114625347
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	1	8
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	2	8
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	3	8
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	4	8
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	5	8
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	6	8
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	7	8
MGP_LPJ_P0090287	zf-C2H2	PF00096.26	2.1e-51	8	8
MGP_LPJ_P0090287	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0090287	-	1871	XM_011248348	MGP_LPJ_P0090287	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_LPJ_G0034047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0034047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0034047	Zfp1	67	40.167	MGP_LPJ_G0030735	Prdm5	67	50.847
MGP_LPJ_G0034047	Zfp1	98	47.059	MGP_LPJ_G0021915	Zfp251	94	47.059
MGP_LPJ_G0034047	Zfp1	99	47.926	MGP_LPJ_G0023141	Zfp51	94	47.926
MGP_LPJ_G0034047	Zfp1	99	40.144	MGP_LPJ_G0018308	Zfp867	95	39.600
MGP_LPJ_G0034047	Zfp1	98	51.440	MGP_LPJ_G0032020	Zfp715	95	51.440
MGP_LPJ_G0034047	Zfp1	67	47.656	MGP_LPJ_G0031827	-	87	45.540
MGP_LPJ_G0034047	Zfp1	100	42.953	MGP_LPJ_G0026827	Zfp334	99	54.028
MGP_LPJ_G0034047	Zfp1	80	57.078	MGP_LPJ_G0031719	Zfp112	72	57.078
MGP_LPJ_G0034047	Zfp1	98	35.381	MGP_LPJ_G0032952	E430018J23Rik	86	35.381
MGP_LPJ_G0034047	Zfp1	78	57.692	MGP_LPJ_G0031892	Zfp420	99	57.692
MGP_LPJ_G0034047	Zfp1	67	39.791	MGP_LPJ_G0031481	Zfp865	80	39.286
MGP_LPJ_G0034047	Zfp1	67	46.559	MGP_LPJ_G0018260	Zfp672	90	46.559
MGP_LPJ_G0034047	Zfp1	64	43.137	MGP_LPJ_G0026864	Zfp64	70	43.137
MGP_LPJ_G0034047	Zfp1	63	49.485	MGP_LPJ_G0029407	Zbtb49	76	48.611
MGP_LPJ_G0034047	Zfp1	79	40.594	MGP_LPJ_G0031756	Zfp574	71	40.594
MGP_LPJ_G0034047	Zfp1	99	52.036	MGP_LPJ_G0023161	Zfp945	99	52.036
MGP_LPJ_G0034047	Zfp1	79	46.460	MGP_LPJ_G0023165	Zscan10	83	46.053
MGP_LPJ_G0034047	Zfp1	98	41.429	MGP_LPJ_G0026401	Zfp661	96	41.429
MGP_LPJ_G0034047	Zfp1	71	56.818	MGP_LPJ_G0032019	Zfp141	97	52.282
MGP_LPJ_G0034047	Zfp1	99	59.091	MGP_LPJ_G0032013	2610021A01Rik	78	59.091
MGP_LPJ_G0034047	Zfp1	75	40.183	MGP_LPJ_G0033890	Zfp319	90	40.183
MGP_LPJ_G0034047	Zfp1	63	39.716	MGP_LPJ_G0030603	Repin1	93	39.716
MGP_LPJ_G0034047	Zfp1	67	42.083	MGP_LPJ_G0028959	Zbtb17	54	46.512
MGP_LPJ_G0034047	Zfp1	99	48.828	MGP_LPJ_G0018163	Zfp454	98	48.828
MGP_LPJ_G0034047	Zfp1	60	46.457	MGP_LPJ_G0029744	Gfi1	100	46.457
MGP_LPJ_G0034047	Zfp1	99	42.769	MGP_LPJ_G0033673	Zfp882	99	45.349
MGP_LPJ_G0034047	Zfp1	60	46.429	MGP_LPJ_G0031473	Zfp628	60	46.073
MGP_LPJ_G0034047	Zfp1	67	45.714	MGP_LPJ_G0024520	Zfp236	60	45.652
MGP_LPJ_G0034047	Zfp1	77	57.042	MGP_LPJ_G0031076	Zfp637	91	57.042
MGP_LPJ_G0034047	Zfp1	99	45.076	MGP_LPJ_G0023139	Zfp677	99	52.263
MGP_LPJ_G0034047	Zfp1	99	48.133	MGP_LPJ_G0020604	Rslcan18	86	48.133
MGP_LPJ_G0034047	Zfp1	98	38.214	MGP_LPJ_G0020605	Zfp759	99	38.214
MGP_LPJ_G0034047	Zfp1	98	50.185	MGP_LPJ_G0031726	Zfp94	96	50.185
MGP_LPJ_G0034047	Zfp1	78	61.905	MGP_LPJ_G0031725	Zfp61	59	61.905
MGP_LPJ_G0034047	Zfp1	100	49.035	MGP_LPJ_G0031724	Zfp108	99	50.862
MGP_LPJ_G0034047	Zfp1	99	51.029	MGP_LPJ_G0034316	Zfp26	89	51.029
MGP_LPJ_G0034047	Zfp1	80	52.252	MGP_LPJ_G0032949	Zfp768	51	52.018