EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0034129 (Gene tree)
Gene ID: -
Gene Symbol: Snai3
Alias: AI643946|Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family zinc finger 3
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 6488 bases
Position: chr8:126120484-126126971
Accession: 1353563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0090554	zf-C2H2	PF00096.26	3.2e-24	1	4
MGP_LPJ_P0090554	zf-C2H2	PF00096.26	3.2e-24	2	4
MGP_LPJ_P0090554	zf-C2H2	PF00096.26	3.2e-24	3	4
MGP_LPJ_P0090554	zf-C2H2	PF00096.26	3.2e-24	4	4
MGP_LPJ_P0090554	zf-met	PF12874.7	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0090554	-	1589	XM_006531074	MGP_LPJ_P0090554	287 (aa)	XP_006531137	Q9QY31

Gene Model

Click here to download MGP_LPJ_G0034129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0034129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0034129	Snai3	55	42.336	MGP_LPJ_G0030735	Prdm5	68	48.544
MGP_LPJ_G0034129	Snai3	57	47.297	MGP_LPJ_G0024520	Zfp236	57	36.242
MGP_LPJ_G0034129	Snai3	99	46.552	MGP_LPJ_G0022449	Snai2	99	46.599
MGP_LPJ_G0034129	Snai3	100	40.667	MGP_LPJ_G0026849	Snai1	99	41.333