EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0034372 (Gene tree)
Gene ID: -
Gene Symbol: Elavl3
Alias: 2600009P04Rik|Huc|PLE21|mHuC
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 3 (Hu antigen C)
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 53438 bases
Position: chr9:19443580-19497017
Accession: 109157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0091217	RRM_5	PF13893.6	4.1e-13	1	2
MGP_LPJ_P0091217	RRM_5	PF13893.6	4.1e-13	2	2
MGP_LPJ_P0091217	RRM_1	PF00076.22	5.4e-64	1	3
MGP_LPJ_P0091217	RRM_1	PF00076.22	5.4e-64	2	3
MGP_LPJ_P0091217	RRM_1	PF00076.22	5.4e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0091217	-	5013	XM_006510021	MGP_LPJ_P0091217	367 (aa)	XP_006510084	Q60900
MGP_LPJ_T0091218	-	1014	-	MGP_LPJ_P0091218	337 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0034372	Elavl3	100	78.400	MGP_LPJ_G0028358	Elavl2	100	79.292
MGP_LPJ_G0034372	Elavl3	73	40.741	MGP_LPJ_G0025262	Celf2	82	34.667
MGP_LPJ_G0034372	Elavl3	92	36.145	MGP_LPJ_G0021700	Pabpc1	58	36.145
MGP_LPJ_G0034372	Elavl3	90	34.940	MGP_LPJ_G0024286	Pabpc2	61	34.940
MGP_LPJ_G0034372	Elavl3	63	37.931	MGP_LPJ_G0035290	Rbms3	70	38.562
MGP_LPJ_G0034372	Elavl3	90	37.179	MGP_LPJ_G0032999	Tial1	73	37.179
MGP_LPJ_G0034372	Elavl3	99	80.323	MGP_LPJ_G0028490	Elavl4	99	79.893
MGP_LPJ_G0034372	Elavl3	90	66.867	MGP_LPJ_G0033249	Elavl1	95	66.265
MGP_LPJ_G0034372	Elavl3	71	42.391	MGP_LPJ_G0026076	Celf1	57	43.590
MGP_LPJ_G0034372	Elavl3	92	36.145	MGP_LPJ_G0023047	Pabpc6	61	36.145
MGP_LPJ_G0034372	Elavl3	89	34.940	MGP_LPJ_G0027482	Celf3	98	35.632
MGP_LPJ_G0034372	Elavl3	80	41.975	MGP_LPJ_G0034798	Celf6	57	42.308
MGP_LPJ_G0034372	Elavl3	77	38.272	MGP_LPJ_G0017472	Celf5	91	31.765
MGP_LPJ_G0034372	Elavl3	50	36.207	MGP_LPJ_G0025695	Rbms1	51	33.645
MGP_LPJ_G0034372	Elavl3	69	33.708	MGP_LPJ_G0035637	Rbmx	86	33.708
MGP_LPJ_G0034372	Elavl3	62	37.500	MGP_LPJ_G0017398	Cirbp	79	37.500
MGP_LPJ_G0034372	Elavl3	70	39.506	MGP_LPJ_G0024123	Celf4	67	39.744
MGP_LPJ_G0034372	Elavl3	90	36.145	MGP_LPJ_G0027128	Pabpc4l	96	36.145
MGP_LPJ_G0034372	Elavl3	90	37.179	MGP_LPJ_G0030871	Tia1	98	31.169
MGP_LPJ_G0034372	Elavl3	59	30.488	MGP_LPJ_G0026769	Pabpc1l	63	38.889