EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0034798 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 29329 bases
Position: chr9:59241205-59270533
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0092384	RRM_1	PF00076.22	2.1e-51	1	3
MGP_LPJ_P0092384	RRM_1	PF00076.22	2.1e-51	2	3
MGP_LPJ_P0092384	RRM_1	PF00076.22	2.1e-51	3	3
MGP_LPJ_P0092382	RRM_1	PF00076.22	2.6e-51	1	3
MGP_LPJ_P0092382	RRM_1	PF00076.22	2.6e-51	2	3
MGP_LPJ_P0092382	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0092382	-	2939	-	MGP_LPJ_P0092382	481 (aa)	-	-
MGP_LPJ_T0092383	-	2890	-	MGP_LPJ_P0092383	162 (aa)	-	-
MGP_LPJ_T0092381	-	3053	XM_006511540	MGP_LPJ_P0092381	182 (aa)	XP_006511603	Q7TN33
MGP_LPJ_T0092386	-	591	-	-	- (aa)	-	-
MGP_LPJ_T0092384	-	2695	-	MGP_LPJ_P0092384	460 (aa)	-	-
MGP_LPJ_T0092385	-	449	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0034798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0034798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0034798	Celf6	100	67.200	MGP_LPJ_G0024123	Celf4	99	67.066
MGP_LPJ_G0034798	Celf6	54	35.802	MGP_LPJ_G0017761	Rbms2	50	35.802
MGP_LPJ_G0034798	Celf6	54	31.818	MGP_LPJ_G0032999	Tial1	53	32.143
MGP_LPJ_G0034798	Celf6	57	44.444	MGP_LPJ_G0033249	Elavl1	97	44.444
MGP_LPJ_G0034798	Celf6	91	45.549	MGP_LPJ_G0026076	Celf1	98	45.135
MGP_LPJ_G0034798	Celf6	62	32.955	MGP_LPJ_G0030871	Tia1	85	36.000
MGP_LPJ_G0034798	Celf6	57	42.308	MGP_LPJ_G0034372	Elavl3	80	41.975
MGP_LPJ_G0034798	Celf6	66	32.500	MGP_LPJ_G0018178	Hnrnpab	65	31.414
MGP_LPJ_G0034798	Celf6	52	42.105	MGP_LPJ_G0035290	Rbms3	82	42.105
MGP_LPJ_G0034798	Celf6	77	39.062	MGP_LPJ_G0023047	Pabpc6	64	39.062
MGP_LPJ_G0034798	Celf6	89	37.037	MGP_LPJ_G0028358	Elavl2	78	40.741
MGP_LPJ_G0034798	Celf6	95	35.802	MGP_LPJ_G0028490	Elavl4	85	40.741
MGP_LPJ_G0034798	Celf6	75	84.783	MGP_LPJ_G0017472	Celf5	93	80.645
MGP_LPJ_G0034798	Celf6	51	34.483	MGP_LPJ_G0035943	Pabpc5	63	34.483
MGP_LPJ_G0034798	Celf6	91	45.567	MGP_LPJ_G0025262	Celf2	79	80.952
MGP_LPJ_G0034798	Celf6	75	85.526	MGP_LPJ_G0027482	Celf3	81	87.368
MGP_LPJ_G0034798	Celf6	79	31.250	MGP_LPJ_G0030637	Hnrnpa2b1	66	32.143