EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0034839 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 22916 bases
Position: chr9:64681572-64704487
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0092562	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_LPJ_P0092563	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_LPJ_P0092561	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0092564	-	695	-	-	- (aa)	-	-
MGP_LPJ_T0092562	-	462	-	MGP_LPJ_P0092562	153 (aa)	-	-
MGP_LPJ_T0092563	-	595	-	MGP_LPJ_P0092563	155 (aa)	-	-
MGP_LPJ_T0092560	-	397	-	-	- (aa)	-	-
MGP_LPJ_T0092561	-	651	-	MGP_LPJ_P0092561	216 (aa)	-	-
MGP_LPJ_T0092559	-	500	-	MGP_LPJ_P0092559	86 (aa)	-	-
MGP_LPJ_T0092558	-	603	-	-	- (aa)	-	-
MGP_LPJ_T0092557	-	726	-	MGP_LPJ_P0092557	86 (aa)	-	P62492

Gene Model

Click here to download MGP_LPJ_G0034839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0034839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0034839	Rab11a	87	38.686	MGP_LPJ_G0030901	Rab7	93	42.857
MGP_LPJ_G0034839	Rab11a	81	34.921	MGP_LPJ_G0027615	Nras	95	37.931
MGP_LPJ_G0034839	Rab11a	90	43.066	MGP_LPJ_G0026893	Rab22a	81	42.038
MGP_LPJ_G0034839	Rab11a	79	39.669	MGP_LPJ_G0031491	Rasl2-9	70	36.364
MGP_LPJ_G0034839	Rab11a	92	34.752	MGP_LPJ_G0015816	Rab23	80	32.984
MGP_LPJ_G0034839	Rab11a	76	31.667	MGP_LPJ_G0019111	Arl4d	58	31.667
MGP_LPJ_G0034839	Rab11a	74	30.303	MGP_LPJ_G0019466	Dnajc27	60	30.303
MGP_LPJ_G0034839	Rab11a	93	48.252	MGP_LPJ_G0024045	Rab18	78	47.531
MGP_LPJ_G0034839	Rab11a	88	35.821	MGP_LPJ_G0035082	Rab6b	77	35.404
MGP_LPJ_G0034839	Rab11a	100	96.078	MGP_LPJ_G0023444	Rab11b	100	90.367
MGP_LPJ_G0034839	Rab11a	93	41.379	MGP_LPJ_G0027136	Rab33b	85	37.799
MGP_LPJ_G0034839	Rab11a	95	70.748	MGP_LPJ_G0027336	Rab25	99	62.150
MGP_LPJ_G0034839	Rab11a	94	39.423	MGP_LPJ_G0036162	Rab9	97	39.423
MGP_LPJ_G0034839	Rab11a	91	56.115	MGP_LPJ_G0021198	Rab2b	95	51.366
MGP_LPJ_G0034839	Rab11a	88	48.148	MGP_LPJ_G0023797	Rab5a	91	41.951
MGP_LPJ_G0034839	Rab11a	94	35.780	MGP_LPJ_G0017261	Rab36	79	35.780
MGP_LPJ_G0034839	Rab11a	93	42.254	MGP_LPJ_G0023888	Rab31	86	41.071
MGP_LPJ_G0034839	Rab11a	88	49.265	MGP_LPJ_G0035754	Rab39b	82	46.857
MGP_LPJ_G0034839	Rab11a	88	49.630	MGP_LPJ_G0019068	Rab5c	90	41.262
MGP_LPJ_G0034839	Rab11a	68	30.065	MGP_LPJ_G0016436	Arl8a	77	30.065
MGP_LPJ_G0034839	Rab11a	88	31.293	MGP_LPJ_G0030285	Rasl11a	60	31.293
MGP_LPJ_G0034839	Rab11a	91	46.763	MGP_LPJ_G0019767	Rab15	93	40.887
MGP_LPJ_G0034839	Rab11a	91	56.835	MGP_LPJ_G0027965	Rab2a	81	54.971
MGP_LPJ_G0034839	Rab11a	89	43.885	MGP_LPJ_G0019273	Rab37	77	45.181
MGP_LPJ_G0034839	Rab11a	97	52.201	MGP_LPJ_G0024612	Rab1b	84	55.357
MGP_LPJ_G0034839	Rab11a	86	34.586	MGP_LPJ_G0029255	Rheb	89	32.927
MGP_LPJ_G0034839	Rab11a	78	31.746	MGP_LPJ_G0019602	Arl4a	60	31.746
MGP_LPJ_G0034839	Rab11a	95	54.110	MGP_LPJ_G0025581	Rab14	97	54.422
MGP_LPJ_G0034839	Rab11a	90	40.426	MGP_LPJ_G0035583	Rab33a	74	39.665
MGP_LPJ_G0034839	Rab11a	89	42.143	MGP_LPJ_G0036012	Rab9b	86	41.040
MGP_LPJ_G0034839	Rab11a	75	40.000	MGP_LPJ_G0022141	Rabl2	67	37.908
MGP_LPJ_G0034839	Rab11a	90	43.796	MGP_LPJ_G0023897	Rab12	70	37.799
MGP_LPJ_G0034839	Rab11a	91	44.604	MGP_LPJ_G0032422	Rab30	97	37.981
MGP_LPJ_G0034839	Rab11a	100	50.000	MGP_LPJ_G0017974	Rab1a	85	52.299
MGP_LPJ_G0034839	Rab11a	81	34.127	MGP_LPJ_G0031384	Kras	87	37.725
MGP_LPJ_G0034839	Rab11a	84	38.281	MGP_LPJ_G0032482	Rab6a	84	35.955
MGP_LPJ_G0034839	Rab11a	81	34.921	MGP_LPJ_G0033130	Hras	85	37.654
MGP_LPJ_G0034839	Rab11a	81	31.746	MGP_LPJ_G0035059	Mras	85	32.768
MGP_LPJ_G0034839	Rab11a	90	49.635	MGP_LPJ_G0029876	Rab35	99	42.512