EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0034961 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 31481 bases
Position: chr9:79124776-79156256
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0093059	KH_1	PF00013.29	4.5e-12	1	1
MGP_LPJ_P0093059	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0093059	-	2207	-	MGP_LPJ_P0093059	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_LPJ_G0034961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0034961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0034961	Ddx43	59	35.678	MGP_LPJ_G0031317	Ddx47	91	34.218
MGP_LPJ_G0034961	Ddx43	56	32.240	MGP_LPJ_G0022580	Eif4a2	91	31.398
MGP_LPJ_G0034961	Ddx43	57	40.310	MGP_LPJ_G0035462	Ddx3x	61	39.259
MGP_LPJ_G0034961	Ddx43	63	40.757	MGP_LPJ_G0022205	Ddx23	54	40.757
MGP_LPJ_G0034961	Ddx43	62	31.358	MGP_LPJ_G0016460	Ddx59	62	31.358
MGP_LPJ_G0034961	Ddx43	63	34.135	MGP_LPJ_G0018766	Ddx52	69	34.135
MGP_LPJ_G0034961	Ddx43	64	36.941	MGP_LPJ_G0020510	Ddx41	65	37.232
MGP_LPJ_G0034961	Ddx43	60	34.913	MGP_LPJ_G0033607	Ddx49	93	34.897
MGP_LPJ_G0034961	Ddx43	54	30.159	MGP_LPJ_G0033979	Ddx28	70	30.423
MGP_LPJ_G0034961	Ddx43	68	44.519	MGP_LPJ_G0019215	Ddx5	89	45.040
MGP_LPJ_G0034961	Ddx43	54	31.831	MGP_LPJ_G0019380	Eif4a3	84	31.831
MGP_LPJ_G0034961	Ddx43	53	32.044	MGP_LPJ_G0030002	Ddx55	58	32.044
MGP_LPJ_G0034961	Ddx43	74	36.270	MGP_LPJ_G0019200	Ddx42	50	36.270
MGP_LPJ_G0034961	Ddx43	60	40.000	MGP_LPJ_G0020838	Ddx4	56	40.000
MGP_LPJ_G0034961	Ddx43	60	39.012	MGP_LPJ_G0016837	D1Pas1	61	39.012
MGP_LPJ_G0034961	Ddx43	68	43.527	MGP_LPJ_G0021977	Ddx17	67	43.527