EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0035115 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 71374 bases
Position: chr9:108298846-108370219
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0093827	eIF2A	PF08662.11	2.2e-10	1	1
MGP_LPJ_P0093826	eIF2A	PF08662.11	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0093828	-	1541	-	-	- (aa)	-	-
MGP_LPJ_T0093829	-	727	-	-	- (aa)	-	-
MGP_LPJ_T0093830	-	526	-	-	- (aa)	-	-
MGP_LPJ_T0093826	-	1695	XM_006511831	MGP_LPJ_P0093826	405 (aa)	XP_006511894	Q8JZX3
MGP_LPJ_T0093827	-	1242	-	MGP_LPJ_P0093827	356 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0035115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0035115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0035115	Poc1a	83	35.714	MGP_LPJ_G0025446	Wdr5	99	30.973
MGP_LPJ_G0035115	Poc1a	82	30.000	MGP_LPJ_G0028264	Prpf4	56	30.000
MGP_LPJ_G0035115	Poc1a	93	33.333	MGP_LPJ_G0027591	Wdr3	58	33.333
MGP_LPJ_G0035115	Poc1a	80	38.000	MGP_LPJ_G0026391	Ciao1	85	38.000
MGP_LPJ_G0035115	Poc1a	82	32.636	MGP_LPJ_G0020765	Utp15	52	32.636
MGP_LPJ_G0035115	Poc1a	81	32.941	MGP_LPJ_G0034725	Wdr61	97	32.161
MGP_LPJ_G0035115	Poc1a	80	30.037	MGP_LPJ_G0024783	Prpf19	55	30.037