EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0035290 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 1125767 bases
Position: chr9:119493669-120619435
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0094845	RRM_1	PF00076.22	1.5e-32	1	2
MGP_LPJ_P0094845	RRM_1	PF00076.22	1.5e-32	2	2
MGP_LPJ_P0094842	RRM_1	PF00076.22	1.2e-31	1	2
MGP_LPJ_P0094842	RRM_1	PF00076.22	1.2e-31	2	2
MGP_LPJ_P0094840	RRM_1	PF00076.22	1.4e-31	1	2
MGP_LPJ_P0094840	RRM_1	PF00076.22	1.4e-31	2	2
MGP_LPJ_P0094837	RRM_1	PF00076.22	1.5e-31	1	2
MGP_LPJ_P0094837	RRM_1	PF00076.22	1.5e-31	2	2
MGP_LPJ_P0094841	RRM_1	PF00076.22	1.5e-31	1	2
MGP_LPJ_P0094841	RRM_1	PF00076.22	1.5e-31	2	2
MGP_LPJ_P0094836	RRM_1	PF00076.22	1.7e-31	1	2
MGP_LPJ_P0094836	RRM_1	PF00076.22	1.7e-31	2	2
MGP_LPJ_P0094839	RRM_1	PF00076.22	2e-31	1	2
MGP_LPJ_P0094839	RRM_1	PF00076.22	2e-31	2	2
MGP_LPJ_P0094843	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0094836	-	7908	XM_017313248	MGP_LPJ_P0094836	431 (aa)	XP_017168737	Q8BWL5
MGP_LPJ_T0094837	-	3320	-	MGP_LPJ_P0094837	414 (aa)	-	-
MGP_LPJ_T0094838	-	1631	-	MGP_LPJ_P0094838	185 (aa)	-	-
MGP_LPJ_T0094839	-	2126	-	MGP_LPJ_P0094839	463 (aa)	-	-
MGP_LPJ_T0094843	-	585	-	MGP_LPJ_P0094843	194 (aa)	-	-
MGP_LPJ_T0094842	-	1983	-	MGP_LPJ_P0094842	386 (aa)	-	-
MGP_LPJ_T0094841	-	2234	-	MGP_LPJ_P0094841	415 (aa)	-	-
MGP_LPJ_T0094840	-	2164	-	MGP_LPJ_P0094840	402 (aa)	-	-
MGP_LPJ_T0094847	-	1754	-	-	- (aa)	-	-
MGP_LPJ_T0094846	-	1438	-	-	- (aa)	-	-
MGP_LPJ_T0094845	-	619	-	MGP_LPJ_P0094845	206 (aa)	-	-
MGP_LPJ_T0094844	-	2027	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0035290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0035290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0035290	Rbms3	99	80.841	MGP_LPJ_G0025695	Rbms1	96	71.538
MGP_LPJ_G0035290	Rbms3	72	40.789	MGP_LPJ_G0024123	Celf4	68	40.789
MGP_LPJ_G0035290	Rbms3	77	30.818	MGP_LPJ_G0026769	Pabpc1l	59	30.818
MGP_LPJ_G0035290	Rbms3	97	34.356	MGP_LPJ_G0033249	Elavl1	91	34.356
MGP_LPJ_G0035290	Rbms3	83	80.663	MGP_LPJ_G0017761	Rbms2	86	66.758
MGP_LPJ_G0035290	Rbms3	77	33.708	MGP_LPJ_G0023047	Pabpc6	59	34.091
MGP_LPJ_G0035290	Rbms3	75	37.079	MGP_LPJ_G0025262	Celf2	77	39.474
MGP_LPJ_G0035290	Rbms3	83	37.097	MGP_LPJ_G0028490	Elavl4	70	36.458
MGP_LPJ_G0035290	Rbms3	68	43.421	MGP_LPJ_G0026076	Celf1	53	43.421
MGP_LPJ_G0035290	Rbms3	70	38.562	MGP_LPJ_G0034372	Elavl3	63	37.931
MGP_LPJ_G0035290	Rbms3	83	37.222	MGP_LPJ_G0028358	Elavl2	69	37.209
MGP_LPJ_G0035290	Rbms3	81	39.474	MGP_LPJ_G0027482	Celf3	94	40.278
MGP_LPJ_G0035290	Rbms3	93	36.134	MGP_LPJ_G0017472	Celf5	57	42.105
MGP_LPJ_G0035290	Rbms3	82	42.105	MGP_LPJ_G0034798	Celf6	52	42.105