EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0035427 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 6207 bases
Position: chrX:2807407-2813613
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0095307	RRM_1	PF00076.22	1.8e-24	1	1
MGP_LPJ_P0095306	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0095307	-	969	-	MGP_LPJ_P0095307	153 (aa)	-	-
MGP_LPJ_T0095306	-	2792	-	MGP_LPJ_P0095306	154 (aa)	-	-
MGP_LPJ_T0095305	-	2234	-	-	- (aa)	-	-
MGP_LPJ_T0095310	-	721	-	-	- (aa)	-	-
MGP_LPJ_T0095309	-	1208	-	-	- (aa)	-	-
MGP_LPJ_T0095308	-	1055	-	MGP_LPJ_P0095308	90 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0035427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0035427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0035427	Rbm3	82	43.243	MGP_LPJ_G0018828	Msi2	61	42.857
MGP_LPJ_G0035427	Rbm3	99	35.955	MGP_LPJ_G0030871	Tia1	70	41.333
MGP_LPJ_G0035427	Rbm3	54	30.120	MGP_LPJ_G0021790	Gm12355	54	31.579
MGP_LPJ_G0035427	Rbm3	82	38.710	MGP_LPJ_G0028358	Elavl2	63	32.911
MGP_LPJ_G0035427	Rbm3	90	35.385	MGP_LPJ_G0027128	Pabpc4l	83	34.286
MGP_LPJ_G0035427	Rbm3	100	63.529	MGP_LPJ_G0017398	Cirbp	99	60.588
MGP_LPJ_G0035427	Rbm3	90	39.326	MGP_LPJ_G0017404	Dazap1	78	46.032
MGP_LPJ_G0035427	Rbm3	80	36.709	MGP_LPJ_G0029681	Hnrnpd	64	37.931
MGP_LPJ_G0035427	Rbm3	73	33.333	MGP_LPJ_G0029999	Snrnp35	55	34.848
MGP_LPJ_G0035427	Rbm3	82	38.710	MGP_LPJ_G0028490	Elavl4	58	31.646
MGP_LPJ_G0035427	Rbm3	78	55.714	MGP_LPJ_G0035637	Rbmx	79	56.790