EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0015768 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 26970 bases
Position: chr1:36756223-36783192
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0018992	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_NODShiLtJ_P0018996	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0018994	-	2047	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0018995	-	1087	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0018996	-	4218	-	MGP_NODShiLtJ_P0018996	237 (aa)	-	-
MGP_NODShiLtJ_T0018997	-	1966	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0018990	-	444	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0018991	-	2557	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0018992	-	4322	-	MGP_NODShiLtJ_P0018992	237 (aa)	-	-
MGP_NODShiLtJ_T0018993	-	4398	-	MGP_NODShiLtJ_P0018993	64 (aa)	-	-
MGP_NODShiLtJ_T0018998	-	437	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0018999	-	1764	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0015768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0015768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0015768	Rab23	64	38.462	MGP_NODShiLtJ_G0018616	Rab34	60	38.462
MGP_NODShiLtJ_G0015768	Rab23	77	38.172	MGP_NODShiLtJ_G0017209	Rab36	69	38.172
MGP_NODShiLtJ_G0015768	Rab23	65	35.000	MGP_NODShiLtJ_G0036041	Rab9	79	35.000
MGP_NODShiLtJ_G0015768	Rab23	67	38.125	MGP_NODShiLtJ_G0023711	Rab5a	74	38.125
MGP_NODShiLtJ_G0015768	Rab23	61	32.192	MGP_NODShiLtJ_G0027505	Nras	95	35.862
MGP_NODShiLtJ_G0015768	Rab23	65	36.129	MGP_NODShiLtJ_G0029158	Rheb	84	36.129
MGP_NODShiLtJ_G0015768	Rab23	80	33.508	MGP_NODShiLtJ_G0023355	Rab11b	88	33.508
MGP_NODShiLtJ_G0015768	Rab23	67	37.500	MGP_NODShiLtJ_G0017738	Rab5b	74	37.500
MGP_NODShiLtJ_G0015768	Rab23	70	34.337	MGP_NODShiLtJ_G0024523	Rab1b	83	34.337
MGP_NODShiLtJ_G0015768	Rab23	74	37.500	MGP_NODShiLtJ_G0032323	Rab30	87	37.500
MGP_NODShiLtJ_G0015768	Rab23	72	34.682	MGP_NODShiLtJ_G0019721	Rab15	81	34.682
MGP_NODShiLtJ_G0015768	Rab23	65	31.410	MGP_NODShiLtJ_G0031291	Kras	94	32.778
MGP_NODShiLtJ_G0015768	Rab23	85	31.683	MGP_NODShiLtJ_G0027215	Rab25	92	31.683
MGP_NODShiLtJ_G0015768	Rab23	66	39.873	MGP_NODShiLtJ_G0032382	Rab6a	76	39.873
MGP_NODShiLtJ_G0015768	Rab23	67	31.765	MGP_NODShiLtJ_G0030188	Rasl11a	69	31.765
MGP_NODShiLtJ_G0015768	Rab23	70	34.337	MGP_NODShiLtJ_G0025488	Rab14	88	35.338
MGP_NODShiLtJ_G0015768	Rab23	66	37.654	MGP_NODShiLtJ_G0035888	Rab9b	80	37.654
MGP_NODShiLtJ_G0015768	Rab23	70	34.337	MGP_NODShiLtJ_G0017921	Rab1a	81	34.337
MGP_NODShiLtJ_G0015768	Rab23	66	41.139	MGP_NODShiLtJ_G0034993	Rab6b	76	41.139
MGP_NODShiLtJ_G0015768	Rab23	69	35.119	MGP_NODShiLtJ_G0023809	Rab12	57	35.119
MGP_NODShiLtJ_G0015768	Rab23	80	30.890	MGP_NODShiLtJ_G0023800	Rab31	93	30.890
MGP_NODShiLtJ_G0015768	Rab23	86	32.850	MGP_NODShiLtJ_G0021129	Rab2b	94	32.850
MGP_NODShiLtJ_G0015768	Rab23	65	36.538	MGP_NODShiLtJ_G0035647	Rab39b	73	36.538
MGP_NODShiLtJ_G0015768	Rab23	70	33.918	MGP_NODShiLtJ_G0030810	Rab7	94	43.478
MGP_NODShiLtJ_G0015768	Rab23	80	32.984	MGP_NODShiLtJ_G0034740	Rab11a	92	34.752
MGP_NODShiLtJ_G0015768	Rab23	61	31.507	MGP_NODShiLtJ_G0033021	Hras	98	30.332
MGP_NODShiLtJ_G0015768	Rab23	75	32.086	MGP_NODShiLtJ_G0029433	Rasl11b	74	32.086
MGP_NODShiLtJ_G0015768	Rab23	83	32.487	MGP_NODShiLtJ_G0027854	Rab2a	95	31.863
MGP_NODShiLtJ_G0015768	Rab23	68	33.129	MGP_NODShiLtJ_G0031397	Rasl2-9	74	33.129
MGP_NODShiLtJ_G0015768	Rab23	67	35.152	MGP_NODShiLtJ_G0027010	Rab33b	72	35.152
MGP_NODShiLtJ_G0015768	Rab23	65	33.766	MGP_NODShiLtJ_G0026777	Rab22a	79	33.766
MGP_NODShiLtJ_G0015768	Rab23	74	35.227	MGP_NODShiLtJ_G0019020	Rab5c	81	35.227
MGP_NODShiLtJ_G0015768	Rab23	77	31.383	MGP_NODShiLtJ_G0035482	Rab33a	79	31.383
MGP_NODShiLtJ_G0015768	Rab23	75	32.961	MGP_NODShiLtJ_G0019228	Rab37	81	32.961