EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0016284 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 17316 bases
Position: chr1:139273638-139290953
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0021596	ResIII	PF04851.15	5.6e-10	1	1
MGP_NODShiLtJ_P0021596	DEAD	PF00270.29	4.5e-63	1	2
MGP_NODShiLtJ_P0021596	DEAD	PF00270.29	4.5e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0021598	-	512	-	MGP_NODShiLtJ_P0021598	170 (aa)	-	-
MGP_NODShiLtJ_T0021599	-	451	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0021596	-	2205	XM_006529794	MGP_NODShiLtJ_P0021596	734 (aa)	XP_006529857	Q8K363
MGP_NODShiLtJ_T0021597	-	622	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0016284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0016284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0016284	Ddx18	57	48.148	MGP_NODShiLtJ_G0018712	Ddx52	68	39.683
MGP_NODShiLtJ_G0016284	Ddx18	67	46.465	MGP_NODShiLtJ_G0029809	Ddx54	50	46.465
MGP_NODShiLtJ_G0016284	Ddx18	68	44.086	MGP_NODShiLtJ_G0025371	Ddx31	72	44.086
MGP_NODShiLtJ_G0016284	Ddx18	57	32.493	MGP_NODShiLtJ_G0021907	Ddx17	54	32.493
MGP_NODShiLtJ_G0016284	Ddx18	57	49.296	MGP_NODShiLtJ_G0033504	Ddx49	92	49.296
MGP_NODShiLtJ_G0016284	Ddx18	55	35.593	MGP_NODShiLtJ_G0016790	D1Pas1	57	34.783
MGP_NODShiLtJ_G0016284	Ddx18	61	36.937	MGP_NODShiLtJ_G0017163	Ddx50	61	34.819
MGP_NODShiLtJ_G0016284	Ddx18	65	45.600	MGP_NODShiLtJ_G0026724	Ddx27	53	44.800
MGP_NODShiLtJ_G0016284	Ddx18	54	32.915	MGP_NODShiLtJ_G0019166	Ddx5	72	31.379
MGP_NODShiLtJ_G0016284	Ddx18	55	35.593	MGP_NODShiLtJ_G0035370	Ddx3x	57	34.615
MGP_NODShiLtJ_G0016284	Ddx18	59	40.129	MGP_NODShiLtJ_G0031223	Ddx47	88	39.159
MGP_NODShiLtJ_G0016284	Ddx18	54	34.951	MGP_NODShiLtJ_G0022507	Eif4a2	90	34.951
MGP_NODShiLtJ_G0016284	Ddx18	56	39.583	MGP_NODShiLtJ_G0017875	Ddx56	92	53.061
MGP_NODShiLtJ_G0016284	Ddx18	52	38.554	MGP_NODShiLtJ_G0033644	Ddx39	90	32.203
MGP_NODShiLtJ_G0016284	Ddx18	55	34.906	MGP_NODShiLtJ_G0018394	Eif4a1	90	34.906
MGP_NODShiLtJ_G0016284	Ddx18	51	43.590	MGP_NODShiLtJ_G0033877	Ddx28	63	43.038
MGP_NODShiLtJ_G0016284	Ddx18	58	32.174	MGP_NODShiLtJ_G0033936	Ddx19b	75	32.174
MGP_NODShiLtJ_G0016284	Ddx18	60	34.259	MGP_NODShiLtJ_G0019335	Eif4a3	89	34.259
MGP_NODShiLtJ_G0016284	Ddx18	59	36.188	MGP_NODShiLtJ_G0029900	Ddx55	75	36.188