EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0016360 (Gene tree)
Gene ID: -
Gene Symbol: Snrpe
Alias: AL022645|C76690|SME
Full Name: small nuclear ribonucleoprotein E
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 6599 bases
Position: chr1:152865080-152871678
Accession: 98346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0021951	LSM	PF01423.22	2.1e-17	1	1
MGP_NODShiLtJ_P0021953	LSM	PF01423.22	8.9e-12	1	1
MGP_NODShiLtJ_P0021954	LSM	PF01423.22	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0021951	-	650	-	MGP_NODShiLtJ_P0021951	92 (aa)	-	P62305
MGP_NODShiLtJ_T0021952	-	653	-	MGP_NODShiLtJ_P0021952	69 (aa)	-	-
MGP_NODShiLtJ_T0021953	-	669	-	MGP_NODShiLtJ_P0021953	91 (aa)	-	-
MGP_NODShiLtJ_T0021954	-	75	-	MGP_NODShiLtJ_P0021954	25 (aa)	-	-
MGP_NODShiLtJ_T0021955	-	597	-	MGP_NODShiLtJ_P0021955	69 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0016360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0016360	Snrpe	77	32.877	MGP_NODShiLtJ_G0030583	Lsm5	76	32.877