EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0017163 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 43158 bases
Position: chr10:68901837-68944994
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0025261	GUCT	PF08152.12	4.7e-28	1	1
MGP_NODShiLtJ_P0025261	ResIII	PF04851.15	5.8e-10	1	1
MGP_NODShiLtJ_P0025261	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0025260	-	2927	XM_006514345	MGP_NODShiLtJ_P0025260	669 (aa)	XP_006514408	Q99MJ9
MGP_NODShiLtJ_T0025261	-	2527	-	MGP_NODShiLtJ_P0025261	734 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0017163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0017163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0017163	Ddx50	90	66.446	MGP_NODShiLtJ_G0017162	Ddx21	78	63.365
MGP_NODShiLtJ_G0017163	Ddx50	53	32.603	MGP_NODShiLtJ_G0020442	Ddx41	57	32.603
MGP_NODShiLtJ_G0017163	Ddx50	54	33.962	MGP_NODShiLtJ_G0021907	Ddx17	55	33.962
MGP_NODShiLtJ_G0017163	Ddx50	51	34.302	MGP_NODShiLtJ_G0019166	Ddx5	70	33.446
MGP_NODShiLtJ_G0017163	Ddx50	55	31.267	MGP_NODShiLtJ_G0022507	Eif4a2	90	30.904
MGP_NODShiLtJ_G0017163	Ddx50	61	30.676	MGP_NODShiLtJ_G0031223	Ddx47	94	30.175
MGP_NODShiLtJ_G0017163	Ddx50	54	31.383	MGP_NODShiLtJ_G0035370	Ddx3x	52	33.239
MGP_NODShiLtJ_G0017163	Ddx50	61	34.819	MGP_NODShiLtJ_G0016284	Ddx18	61	36.937
MGP_NODShiLtJ_G0017163	Ddx50	53	33.799	MGP_NODShiLtJ_G0034865	Ddx43	54	33.799
MGP_NODShiLtJ_G0017163	Ddx50	54	31.383	MGP_NODShiLtJ_G0016790	D1Pas1	56	32.181
MGP_NODShiLtJ_G0017163	Ddx50	55	32.267	MGP_NODShiLtJ_G0018394	Eif4a1	88	31.720
MGP_NODShiLtJ_G0017163	Ddx50	61	34.272	MGP_NODShiLtJ_G0026724	Ddx27	52	34.129
MGP_NODShiLtJ_G0017163	Ddx50	55	32.353	MGP_NODShiLtJ_G0019335	Eif4a3	86	32.353