EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0017255 (Gene tree)
Gene ID: -
Gene Symbol: Adarb1
Alias: 1700057H01Rik|ADAR2|AW124433|AW558573|Adar2|BB220382|D10Bwg0447e|RED1|Red1
Full Name: adenosine deaminase%2C RNA-specific%2C B1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 132319 bases
Position: chr10:85480876-85613194
Accession: 891999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0025678	dsrm	PF00035.26	3.1e-27	1	2
MGP_NODShiLtJ_P0025678	dsrm	PF00035.26	3.1e-27	2	2
MGP_NODShiLtJ_P0025677	dsrm	PF00035.26	3.3e-27	1	2
MGP_NODShiLtJ_P0025677	dsrm	PF00035.26	3.3e-27	2	2
MGP_NODShiLtJ_P0025682	dsrm	PF00035.26	3.3e-27	1	2
MGP_NODShiLtJ_P0025682	dsrm	PF00035.26	3.3e-27	2	2
MGP_NODShiLtJ_P0025678	A_deamin	PF02137.18	5.1e-115	1	1
MGP_NODShiLtJ_P0025677	A_deamin	PF02137.18	2.6e-114	1	1
MGP_NODShiLtJ_P0025682	A_deamin	PF02137.18	2.6e-114	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0025679	-	6630	-	MGP_NODShiLtJ_P0025679	82 (aa)	-	-
MGP_NODShiLtJ_T0025678	-	6549	-	MGP_NODShiLtJ_P0025678	701 (aa)	-	-
MGP_NODShiLtJ_T0025677	-	6584	XM_006513062	MGP_NODShiLtJ_P0025677	711 (aa)	XP_006513125	Q91ZS8
MGP_NODShiLtJ_T0025688	-	383	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0025689	-	451	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0025680	-	6557	-	MGP_NODShiLtJ_P0025680	82 (aa)	-	-
MGP_NODShiLtJ_T0025681	-	6583	-	MGP_NODShiLtJ_P0025681	38 (aa)	-	-
MGP_NODShiLtJ_T0025682	-	6662	-	MGP_NODShiLtJ_P0025682	711 (aa)	-	-
MGP_NODShiLtJ_T0025683	-	2584	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0025684	-	2577	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0025685	-	3289	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0025686	-	670	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0025687	-	704	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0017255	Adarb1	99	53.803	MGP_NODShiLtJ_G0020065	Adarb2	96	52.901
MGP_NODShiLtJ_G0017255	Adarb1	89	33.028	MGP_NODShiLtJ_G0027259	Adar	92	33.131