EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0017738 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 21936 bases
Position: chr10:145071196-145093131
Accession: 105938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0027320	MMR_HSR1	PF01926.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0027320	-	2039	XM_006513384	MGP_NODShiLtJ_P0027320	215 (aa)	XP_006513447	P61021

Gene Model

Click here to download MGP_NODShiLtJ_G0017738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0017738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0017738	Rab5b	78	42.857	MGP_NODShiLtJ_G0032323	Rab30	83	42.857
MGP_NODShiLtJ_G0017738	Rab5b	82	45.198	MGP_NODShiLtJ_G0024523	Rab1b	87	45.198
MGP_NODShiLtJ_G0017738	Rab5b	75	45.963	MGP_NODShiLtJ_G0027215	Rab25	76	45.963
MGP_NODShiLtJ_G0017738	Rab5b	94	41.827	MGP_NODShiLtJ_G0019228	Rab37	93	41.827
MGP_NODShiLtJ_G0017738	Rab5b	74	37.195	MGP_NODShiLtJ_G0022069	Rabl2	72	37.195
MGP_NODShiLtJ_G0017738	Rab5b	55	30.159	MGP_NODShiLtJ_G0019557	Arl4a	60	30.159
MGP_NODShiLtJ_G0017738	Rab5b	77	45.181	MGP_NODShiLtJ_G0032382	Rab6a	80	45.181
MGP_NODShiLtJ_G0017738	Rab5b	91	37.949	MGP_NODShiLtJ_G0027854	Rab2a	76	43.478
MGP_NODShiLtJ_G0017738	Rab5b	74	37.500	MGP_NODShiLtJ_G0015768	Rab23	67	37.500
MGP_NODShiLtJ_G0017738	Rab5b	78	35.882	MGP_NODShiLtJ_G0035647	Rab39b	80	35.882
MGP_NODShiLtJ_G0017738	Rab5b	83	37.705	MGP_NODShiLtJ_G0035482	Rab33a	77	37.705
MGP_NODShiLtJ_G0017738	Rab5b	62	30.986	MGP_NODShiLtJ_G0030909	Arl8b	73	30.986
MGP_NODShiLtJ_G0017738	Rab5b	91	47.959	MGP_NODShiLtJ_G0023800	Rab31	98	47.959
MGP_NODShiLtJ_G0017738	Rab5b	82	36.932	MGP_NODShiLtJ_G0019721	Rab15	83	36.932
MGP_NODShiLtJ_G0017738	Rab5b	62	30.986	MGP_NODShiLtJ_G0016389	Arl8a	73	30.986
MGP_NODShiLtJ_G0017738	Rab5b	78	42.442	MGP_NODShiLtJ_G0030810	Rab7	90	49.296
MGP_NODShiLtJ_G0017738	Rab5b	100	81.860	MGP_NODShiLtJ_G0023711	Rab5a	100	81.860
MGP_NODShiLtJ_G0017738	Rab5b	80	33.333	MGP_NODShiLtJ_G0031397	Rasl2-9	76	33.333
MGP_NODShiLtJ_G0017738	Rab5b	90	43.367	MGP_NODShiLtJ_G0017921	Rab1a	95	43.367
MGP_NODShiLtJ_G0017738	Rab5b	85	35.326	MGP_NODShiLtJ_G0023809	Rab12	63	35.326
MGP_NODShiLtJ_G0017738	Rab5b	75	47.205	MGP_NODShiLtJ_G0034740	Rab11a	88	48.889
MGP_NODShiLtJ_G0017738	Rab5b	73	35.000	MGP_NODShiLtJ_G0017209	Rab36	60	35.000
MGP_NODShiLtJ_G0017738	Rab5b	82	32.787	MGP_NODShiLtJ_G0033021	Hras	96	32.787
MGP_NODShiLtJ_G0017738	Rab5b	97	86.124	MGP_NODShiLtJ_G0019020	Rab5c	97	86.124
MGP_NODShiLtJ_G0017738	Rab5b	75	44.720	MGP_NODShiLtJ_G0025488	Rab14	89	41.481
MGP_NODShiLtJ_G0017738	Rab5b	90	47.938	MGP_NODShiLtJ_G0026777	Rab22a	98	47.938
MGP_NODShiLtJ_G0017738	Rab5b	84	30.220	MGP_NODShiLtJ_G0027505	Nras	99	33.333
MGP_NODShiLtJ_G0017738	Rab5b	93	35.294	MGP_NODShiLtJ_G0036041	Rab9	99	35.294
MGP_NODShiLtJ_G0017738	Rab5b	90	43.627	MGP_NODShiLtJ_G0023355	Rab11b	94	43.627
MGP_NODShiLtJ_G0017738	Rab5b	86	40.761	MGP_NODShiLtJ_G0021129	Rab2b	85	40.761
MGP_NODShiLtJ_G0017738	Rab5b	77	45.783	MGP_NODShiLtJ_G0034993	Rab6b	80	45.783
MGP_NODShiLtJ_G0017738	Rab5b	82	39.344	MGP_NODShiLtJ_G0027010	Rab33b	79	39.130
MGP_NODShiLtJ_G0017738	Rab5b	90	35.323	MGP_NODShiLtJ_G0035888	Rab9b	97	35.323
MGP_NODShiLtJ_G0017738	Rab5b	82	33.333	MGP_NODShiLtJ_G0029158	Rheb	93	33.333
MGP_NODShiLtJ_G0017738	Rab5b	77	32.335	MGP_NODShiLtJ_G0031291	Kras	88	32.335