EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0017811 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 20667 bases
Position: chr11:127649-148315
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0027444	zf-C2H2	PF00096.26	3.9e-26	1	5
MGP_NODShiLtJ_P0027444	zf-C2H2	PF00096.26	3.9e-26	2	5
MGP_NODShiLtJ_P0027444	zf-C2H2	PF00096.26	3.9e-26	3	5
MGP_NODShiLtJ_P0027444	zf-C2H2	PF00096.26	3.9e-26	4	5
MGP_NODShiLtJ_P0027444	zf-C2H2	PF00096.26	3.9e-26	5	5
MGP_NODShiLtJ_P0027446	zf-C2H2	PF00096.26	5e-20	1	4
MGP_NODShiLtJ_P0027446	zf-C2H2	PF00096.26	5e-20	2	4
MGP_NODShiLtJ_P0027446	zf-C2H2	PF00096.26	5e-20	3	4
MGP_NODShiLtJ_P0027446	zf-C2H2	PF00096.26	5e-20	4	4
MGP_NODShiLtJ_P0027447	zf-C2H2	PF00096.26	1.8e-16	1	3
MGP_NODShiLtJ_P0027447	zf-C2H2	PF00096.26	1.8e-16	2	3
MGP_NODShiLtJ_P0027447	zf-C2H2	PF00096.26	1.8e-16	3	3
MGP_NODShiLtJ_P0027445	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_NODShiLtJ_P0027445	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_NODShiLtJ_P0027445	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_NODShiLtJ_P0027444	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0027440	-	791	NR_045109	-	- (aa)	-	-
MGP_NODShiLtJ_T0027441	-	1853	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0027442	-	844	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0027443	-	1904	-	MGP_NODShiLtJ_P0027443	102 (aa)	-	-
MGP_NODShiLtJ_T0027444	-	3659	-	MGP_NODShiLtJ_P0027444	687 (aa)	-	-
MGP_NODShiLtJ_T0027445	-	2857	-	MGP_NODShiLtJ_P0027445	537 (aa)	-	-
MGP_NODShiLtJ_T0027446	-	3118	-	MGP_NODShiLtJ_P0027446	641 (aa)	-	-
MGP_NODShiLtJ_T0027447	-	3173	-	MGP_NODShiLtJ_P0027447	537 (aa)	-	-
MGP_NODShiLtJ_T0027448	-	1249	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0027449	-	456	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0027451	-	495	-	MGP_NODShiLtJ_P0027451	70 (aa)	-	-
MGP_NODShiLtJ_T0027450	-	652	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0017811	Patz1	87	36.232	MGP_NODShiLtJ_G0023818	Zbtb14	91	38.889