EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0017921 (Gene tree)
Gene ID: -
Gene Symbol: Rab1a
Alias: ECO:0000313|MGI:MGI:97842},GN Rab1A|Gtbp|Rab-1|Rab1|Rab1 {ECO:0000313|EMBL:EDL07829.1,GN ECO:0000313|Ensembl:ENSMUSP00000127330|Ypt1|mKIAA3012|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 26152 bases
Position: chr11:19764846-19790997
Accession: 97842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0027937	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0027935	-	962	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0027936	-	702	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0027937	-	2587	-	MGP_NODShiLtJ_P0027937	205 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0017921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0017921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0017921	Rab1a	80	38.415	MGP_NODShiLtJ_G0031291	Kras	97	35.676
MGP_NODShiLtJ_G0017921	Rab1a	58	34.454	MGP_NODShiLtJ_G0016389	Arl8a	62	34.454
MGP_NODShiLtJ_G0017921	Rab1a	95	43.814	MGP_NODShiLtJ_G0023711	Rab5a	90	43.814
MGP_NODShiLtJ_G0017921	Rab1a	79	31.902	MGP_NODShiLtJ_G0031397	Rasl2-9	73	31.902
MGP_NODShiLtJ_G0017921	Rab1a	85	52.299	MGP_NODShiLtJ_G0034740	Rab11a	100	50.000
MGP_NODShiLtJ_G0017921	Rab1a	95	33.175	MGP_NODShiLtJ_G0017209	Rab36	79	33.175
MGP_NODShiLtJ_G0017921	Rab1a	57	31.092	MGP_NODShiLtJ_G0016157	Arl4c	61	31.092
MGP_NODShiLtJ_G0017921	Rab1a	84	35.028	MGP_NODShiLtJ_G0033021	Hras	93	35.028
MGP_NODShiLtJ_G0017921	Rab1a	69	30.201	MGP_NODShiLtJ_G0019063	Arl4d	73	30.201
MGP_NODShiLtJ_G0017921	Rab1a	95	43.590	MGP_NODShiLtJ_G0019020	Rab5c	89	43.590
MGP_NODShiLtJ_G0017921	Rab1a	57	33.058	MGP_NODShiLtJ_G0024579	Arl2	61	33.058
MGP_NODShiLtJ_G0017921	Rab1a	99	44.554	MGP_NODShiLtJ_G0025488	Rab14	97	47.619
MGP_NODShiLtJ_G0017921	Rab1a	90	48.108	MGP_NODShiLtJ_G0027854	Rab2a	99	45.238
MGP_NODShiLtJ_G0017921	Rab1a	95	38.660	MGP_NODShiLtJ_G0026777	Rab22a	97	38.660
MGP_NODShiLtJ_G0017921	Rab1a	80	38.415	MGP_NODShiLtJ_G0027505	Nras	96	39.041
MGP_NODShiLtJ_G0017921	Rab1a	76	38.994	MGP_NODShiLtJ_G0036041	Rab9	79	38.994
MGP_NODShiLtJ_G0017921	Rab1a	100	45.581	MGP_NODShiLtJ_G0023355	Rab11b	99	45.581
MGP_NODShiLtJ_G0017921	Rab1a	97	46.465	MGP_NODShiLtJ_G0021129	Rab2b	92	46.465
MGP_NODShiLtJ_G0017921	Rab1a	83	43.429	MGP_NODShiLtJ_G0027010	Rab33b	76	43.429
MGP_NODShiLtJ_G0017921	Rab1a	76	38.994	MGP_NODShiLtJ_G0035888	Rab9b	79	38.994
MGP_NODShiLtJ_G0017921	Rab1a	77	40.491	MGP_NODShiLtJ_G0018616	Rab34	62	40.491
MGP_NODShiLtJ_G0017921	Rab1a	82	32.544	MGP_NODShiLtJ_G0029158	Rheb	91	32.544
MGP_NODShiLtJ_G0017921	Rab1a	95	43.367	MGP_NODShiLtJ_G0017738	Rab5b	90	43.367
MGP_NODShiLtJ_G0017921	Rab1a	80	36.527	MGP_NODShiLtJ_G0034970	Mras	80	36.527
MGP_NODShiLtJ_G0017921	Rab1a	68	30.496	MGP_NODShiLtJ_G0025046	Arl3	72	30.496
MGP_NODShiLtJ_G0017921	Rab1a	78	39.264	MGP_NODShiLtJ_G0030810	Rab7	100	39.241
MGP_NODShiLtJ_G0017921	Rab1a	81	50.602	MGP_NODShiLtJ_G0032323	Rab30	82	50.602
MGP_NODShiLtJ_G0017921	Rab1a	99	92.079	MGP_NODShiLtJ_G0024523	Rab1b	100	92.079
MGP_NODShiLtJ_G0017921	Rab1a	82	45.833	MGP_NODShiLtJ_G0027215	Rab25	79	45.833
MGP_NODShiLtJ_G0017921	Rab1a	81	45.238	MGP_NODShiLtJ_G0019228	Rab37	78	45.238
MGP_NODShiLtJ_G0017921	Rab1a	62	30.303	MGP_NODShiLtJ_G0027109	Arl14	65	30.303
MGP_NODShiLtJ_G0017921	Rab1a	75	37.580	MGP_NODShiLtJ_G0022069	Rabl2	67	37.580
MGP_NODShiLtJ_G0017921	Rab1a	82	50.296	MGP_NODShiLtJ_G0023809	Rab12	58	50.296
MGP_NODShiLtJ_G0017921	Rab1a	57	31.933	MGP_NODShiLtJ_G0019557	Arl4a	59	31.933
MGP_NODShiLtJ_G0017921	Rab1a	94	38.384	MGP_NODShiLtJ_G0032382	Rab6a	94	38.384
MGP_NODShiLtJ_G0017921	Rab1a	81	34.337	MGP_NODShiLtJ_G0015768	Rab23	70	34.337
MGP_NODShiLtJ_G0017921	Rab1a	86	43.820	MGP_NODShiLtJ_G0035647	Rab39b	84	43.820
MGP_NODShiLtJ_G0017921	Rab1a	94	43.434	MGP_NODShiLtJ_G0035482	Rab33a	83	43.434
MGP_NODShiLtJ_G0017921	Rab1a	57	32.203	MGP_NODShiLtJ_G0030909	Arl8b	61	32.203
MGP_NODShiLtJ_G0017921	Rab1a	90	39.785	MGP_NODShiLtJ_G0023800	Rab31	95	39.785
MGP_NODShiLtJ_G0017921	Rab1a	80	50.909	MGP_NODShiLtJ_G0019721	Rab15	78	50.909
MGP_NODShiLtJ_G0017921	Rab1a	94	36.410	MGP_NODShiLtJ_G0034993	Rab6b	94	36.410