EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0017997 (Gene tree)
Gene ID: -
Gene Symbol: Npm1
Alias: B23|NO38|Npm|nucleolar protein NO38
Full Name: nucleophosmin 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 11865 bases
Position: chr11:34958830-34970694
Accession: 106184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0028272	Nucleoplasmin	PF03066.15	1.7e-42	1	1
MGP_NODShiLtJ_P0028270	Nucleoplasmin	PF03066.15	2e-42	1	1
MGP_NODShiLtJ_P0028269	Nucleoplasmin	PF03066.15	2.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0028272	-	1159	-	MGP_NODShiLtJ_P0028272	257 (aa)	-	-
MGP_NODShiLtJ_T0028269	-	1657	-	MGP_NODShiLtJ_P0028269	292 (aa)	-	Q61937
MGP_NODShiLtJ_T0028273	-	440	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0028270	-	1213	-	MGP_NODShiLtJ_P0028270	264 (aa)	-	-
MGP_NODShiLtJ_T0028271	-	846	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0017997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0017997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0017997	Npm1	50	36.364	MGP_NODShiLtJ_G0025027	Npm3	62	40.179
MGP_NODShiLtJ_G0017997	Npm1	90	85.281	MGP_NODShiLtJ_G0034173	Gm5611	77	85.526