EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0018061 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 10544 bases
Position: chr11:53049545-53060088
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0028504	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_NODShiLtJ_P0028503	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0028504	-	1213	-	MGP_NODShiLtJ_P0028504	288 (aa)	-	-
MGP_NODShiLtJ_T0028502	-	3832	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0028503	-	2259	-	MGP_NODShiLtJ_P0028503	409 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0018061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0018061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018061	Irgm1	89	31.937	MGP_NODShiLtJ_G0018069	Ifi47	91	31.937
MGP_NODShiLtJ_G0018061	Irgm1	84	38.554	MGP_NODShiLtJ_G0018063	-	82	38.554
MGP_NODShiLtJ_G0018061	Irgm1	82	34.926	MGP_NODShiLtJ_G0018067	Tgtp1	74	33.435
MGP_NODShiLtJ_G0018061	Irgm1	93	33.696	MGP_NODShiLtJ_G0027322	Iigp1	79	32.515
MGP_NODShiLtJ_G0018061	Irgm1	83	62.185	MGP_NODShiLtJ_G0018199	Irgm2	92	50.135
MGP_NODShiLtJ_G0018061	Irgm1	89	56.031	MGP_NODShiLtJ_G0018198	Igtp	90	49.740
MGP_NODShiLtJ_G0018061	Irgm1	76	35.169	MGP_NODShiLtJ_G0031642	Irgc1	71	30.183
MGP_NODShiLtJ_G0018061	Irgm1	78	36.052	MGP_NODShiLtJ_G0024288	Gm4951	76	32.362