EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0018107 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 16548 bases
Position: chr11:55425294-55441841
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_NODShiLtJ_P0028661	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_NODShiLtJ_P0028661	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0028661	-	2112	XM_006533208	MGP_NODShiLtJ_P0028661	536 (aa)	XP_006533271	Q5NCH5
MGP_NODShiLtJ_T0028663	-	722	-	MGP_NODShiLtJ_P0028663	122 (aa)	-	-
MGP_NODShiLtJ_T0028662	-	579	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0028664	-	606	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0018107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0018107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0018107	Zfp454	98	52.692	MGP_NODShiLtJ_G0020540	Zfp759	100	52.692
MGP_NODShiLtJ_G0018107	Zfp454	67	51.309	MGP_NODShiLtJ_G0031379	Zfp628	60	49.451
MGP_NODShiLtJ_G0018107	Zfp454	97	37.859	MGP_NODShiLtJ_G0032842	9130019O22Rik	90	44.695
MGP_NODShiLtJ_G0018107	Zfp454	99	44.019	MGP_NODShiLtJ_G0032843	-	89	45.385
MGP_NODShiLtJ_G0018107	Zfp454	99	49.485	MGP_NODShiLtJ_G0023048	Zfp677	99	49.315
MGP_NODShiLtJ_G0018107	Zfp454	68	38.571	MGP_NODShiLtJ_G0030639	Prdm5	78	38.571
MGP_NODShiLtJ_G0018107	Zfp454	65	36.493	MGP_NODShiLtJ_G0031390	Zfp784	71	36.493
MGP_NODShiLtJ_G0018107	Zfp454	98	49.008	MGP_NODShiLtJ_G0031629	Zfp112	72	57.143
MGP_NODShiLtJ_G0018107	Zfp454	75	42.982	MGP_NODShiLtJ_G0024432	Zfp236	62	42.697
MGP_NODShiLtJ_G0018107	Zfp454	98	50.282	MGP_NODShiLtJ_G0020555	Zfp748	100	50.282
MGP_NODShiLtJ_G0018107	Zfp454	98	42.508	MGP_NODShiLtJ_G0026710	Zfp334	99	44.615
MGP_NODShiLtJ_G0018107	Zfp454	100	49.851	MGP_NODShiLtJ_G0023050	Zfp51	95	60.714
MGP_NODShiLtJ_G0018107	Zfp454	65	47.423	MGP_NODShiLtJ_G0029310	Zbtb49	63	50.000
MGP_NODShiLtJ_G0018107	Zfp454	68	38.320	MGP_NODShiLtJ_G0018202	Zfp672	90	42.029
MGP_NODShiLtJ_G0018107	Zfp454	86	49.080	MGP_NODShiLtJ_G0020539	Rslcan18	87	49.080
MGP_NODShiLtJ_G0018107	Zfp454	69	37.600	MGP_NODShiLtJ_G0033787	Zfp319	91	37.989
MGP_NODShiLtJ_G0018107	Zfp454	69	60.345	MGP_NODShiLtJ_G0030984	Zfp637	80	55.208
MGP_NODShiLtJ_G0018107	Zfp454	99	53.604	MGP_NODShiLtJ_G0021849	Zfp251	95	51.948
MGP_NODShiLtJ_G0018107	Zfp454	87	48.199	MGP_NODShiLtJ_G0031938	Zfp715	61	57.778
MGP_NODShiLtJ_G0018107	Zfp454	100	55.556	MGP_NODShiLtJ_G0026280	Zfp661	98	55.405
MGP_NODShiLtJ_G0018107	Zfp454	82	36.599	MGP_NODShiLtJ_G0030504	Repin1	98	35.252
MGP_NODShiLtJ_G0018107	Zfp454	98	47.879	MGP_NODShiLtJ_G0018250	Zfp867	96	49.583
MGP_NODShiLtJ_G0018107	Zfp454	98	48.828	MGP_NODShiLtJ_G0033947	Zfp1	99	48.828
MGP_NODShiLtJ_G0018107	Zfp454	65	42.424	MGP_NODShiLtJ_G0028853	Zbtb17	55	43.322
MGP_NODShiLtJ_G0018107	Zfp454	69	39.130	MGP_NODShiLtJ_G0018837	Zfp652	56	38.596
MGP_NODShiLtJ_G0018107	Zfp454	99	44.019	MGP_NODShiLtJ_G0032844	E430018J23Rik	89	45.385
MGP_NODShiLtJ_G0018107	Zfp454	68	51.095	MGP_NODShiLtJ_G0032840	Zfp768	51	50.523
MGP_NODShiLtJ_G0018107	Zfp454	98	51.136	MGP_NODShiLtJ_G0034217	Zfp26	89	51.136
MGP_NODShiLtJ_G0018107	Zfp454	98	41.779	MGP_NODShiLtJ_G0033575	Zfp882	99	44.110
MGP_NODShiLtJ_G0018107	Zfp454	70	35.714	MGP_NODShiLtJ_G0031667	Zfp574	88	37.500
MGP_NODShiLtJ_G0018107	Zfp454	70	41.854	MGP_NODShiLtJ_G0023077	Zscan10	75	44.554
MGP_NODShiLtJ_G0018107	Zfp454	99	45.822	MGP_NODShiLtJ_G0023070	Zfp945	99	46.197
MGP_NODShiLtJ_G0018107	Zfp454	70	53.535	MGP_NODShiLtJ_G0020128	Zkscan4	52	53.535
MGP_NODShiLtJ_G0018107	Zfp454	71	57.803	MGP_NODShiLtJ_G0031804	Zfp420	98	59.532
MGP_NODShiLtJ_G0018107	Zfp454	68	45.745	MGP_NODShiLtJ_G0026748	Zfp64	73	35.125
MGP_NODShiLtJ_G0018107	Zfp454	67	42.623	MGP_NODShiLtJ_G0031387	Zfp865	80	36.486
MGP_NODShiLtJ_G0018107	Zfp454	82	57.778	MGP_NODShiLtJ_G0031630	Zfp235	78	57.778
MGP_NODShiLtJ_G0018107	Zfp454	76	53.448	MGP_NODShiLtJ_G0031636	Zfp61	59	66.667
MGP_NODShiLtJ_G0018107	Zfp454	98	50.523	MGP_NODShiLtJ_G0031637	Zfp94	97	50.523
MGP_NODShiLtJ_G0018107	Zfp454	98	50.836	MGP_NODShiLtJ_G0031634	Zfp108	99	50.836